RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MYLK2Q9H1R3 596 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 MANSC1Q9H8J5 431 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 CILPO75339 1184 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 KCNA4P22459 653 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 COPS2P61201 443 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 C4orf50Q6ZRC1 276 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 POLNQ7Z5Q5 900 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 SDCCAG8Q86SQ7 713 aaPredicted RBP16.8■□□□□ 0.28
RAB40B-206ENST00000571995 EIF1ADQ8N9N8 165 aaKnown RBP16.8■□□□□ 0.28
RAB40B-206ENST00000571995 ZMAT2Q96NC0 199 aaKnown RBP16.8■□□□□ 0.28
RAB40B-206ENST00000571995 ZNF518BQ9C0D4 1074 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB40B-206ENST00000571995 STAP1Q9ULZ2 295 aa16.8■□□□□ 0.28
RAB40B-206ENST00000571995 UBQLN1Q9UMX0 589 aaKnown RBP16.8■□□□□ 0.28
RAB40B-206ENST00000571995 C17orf102A2RUQ5 167 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 TXNDC9O14530 226 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 TSPAN3O60637 253 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ENDOD1O94919 500 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 JCHAINP01591 159 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 PGGT1BP53609 377 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 RPL10AP62906 217 aaKnown RBP16.79■□□□□ 0.28
RAB40B-206ENST00000571995 PITX1P78337 314 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ARHGAP1Q07960 439 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 RSRC1Q96IZ7 334 aaKnown RBP16.79■□□□□ 0.28
RAB40B-206ENST00000571995 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 PACSIN3Q9UKS6 424 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 RPS6KL1Q9Y6S9 549 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
RAB40B-206ENST00000571995 HAUS5O94927 633 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 OR4Q2P0C623 313 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 BRCC3P46736 316 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 CYP1B1Q16678 543 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 CCDC14Q49A88 953 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 PPP1R2P3Q6NXS1 205 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ISLR2Q6UXK2 745 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 METTL23Q86XA0 190 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 IGDCC3Q8IVU1 814 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 TBCBQ99426 244 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 MT-CO1P00395 513 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 BOLA3Q53S33 107 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 PRPF39Q86UA1 669 aaKnown RBP16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 ADAM7Q9H2U9 754 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 FZD8Q9H461 694 aa16.79■□□□□ 0.28
RAB40B-206ENST00000571995 TCRBV9S1A1TA0A576 114 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 FAM200BP0CF97 657 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 IVDP26440 423 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 SLC26A2P50443 739 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-206ENST00000571995 TRMT10BQ6PF06 316 aaKnown RBP16.78■□□□□ 0.28
RAB40B-206ENST00000571995 NPLOC4Q8TAT6 608 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 ZNF75CPQ92670 426 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-206ENST00000571995 ASB7Q9H672 318 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 NMRK2Q9NPI5 230 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 CNTRLQ7Z7A1 2325 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 APOC4-APOC2K7ER74 178 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 B4GALT4O60513 344 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 APOC2P02655 101 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 ELNP15502 786 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 TRABD2AQ86V40 505 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 TTC30AQ86WT1 665 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 EFCAB3Q8N7B9 438 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 OR6P1Q8NGX9 317 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 NUDCD1Q96RS6 583 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 TTC1Q99614 292 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 NCAPGQ9BPX3 1015 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 SKAP2O75563 359 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-206ENST00000571995 KRT16P08779 473 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 MYL2P10916 166 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 MGAT1P26572 445 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 GPD2P43304 727 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 RASSF2P50749 326 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 MUM1Q2TAK8 710 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 BBS12Q6ZW61 710 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 CCDC185Q8N715 623 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 ETNK2Q9NVF9 386 aa16.78■□□□□ 0.28
RAB40B-206ENST00000571995 SMIM28A0A1B0GU29 152 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 KRT38O76015 456 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 ERVK-10P10266 1014 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 TAC1P20366 129 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 SERPINB3P29508 390 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 GJA5P36382 358 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 ZNF143P52747 638 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-206ENST00000571995 C6orf163Q5TEZ5 329 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 MAGEB18Q96M61 343 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 RNF157Q96PX1 679 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 PAK5Q9P286 719 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 FAM237BA0A1B0GVD1 139 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 PAPSS1O43252 624 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-206ENST00000571995 BUD23O43709 281 aaKnown RBP16.77■□□□□ 0.28
RAB40B-206ENST00000571995 MMP3P08254 477 aa16.77■□□□□ 0.28
RAB40B-206ENST00000571995 ZBTB48P10074 688 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms