RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FRMD7Q6ZUT3 714 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 TMEM126BQ8IUX1 230 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 ADGRF2Q8IZF7 708 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 CNBD2Q96M20 576 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 KCNK16Q96T55 309 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 MMP19Q99542 508 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 NTPCRQ9BSD7 190 aaKnown RBP17.41■□□□□ 0.38
LITAF-209ENST00000571688 DNAJC28Q9NX36 388 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 AK5Q9Y6K8 562 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 PTPRJQ12913 1337 aa17.41■□□□□ 0.38
LITAF-209ENST00000571688 MYOCOSA0A1B0GUC4 107 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 HMX2A2RU54 273 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 H3BSA7 217 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 APOC2P02655 101 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 CD97P48960 835 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 ZNF132P52740 706 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 LPIN1Q14693 890 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
LITAF-209ENST00000571688 XKR9Q5GH70 373 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 KCNT1Q5JUK3 1230 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 SYCP2LQ5T4T6 812 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 PDPK2PQ6A1A2 396 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 PAOXQ6QHF9 649 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 TRIM67Q6ZTA4 783 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 RNF168Q8IYW5 571 aaPredicted RBP17.4■□□□□ 0.38
LITAF-209ENST00000571688 SAMD3Q8N6K7 520 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 JDP2Q8WYK2 163 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 FAM198AQ9UFP1 575 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 MCF2LO15068 1137 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 BBOX1O75936 387 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 KRT7P08729 469 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 FAM58BPP0C7Q3 252 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 CSH1P0DML2 217 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 CSH2P0DML3 217 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 IDH3AP50213 366 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 RARS2Q5T160 578 aaKnown RBP17.4■□□□□ 0.38
LITAF-209ENST00000571688 ARFGAP1Q8N6T3 406 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 PPP1R14CQ8TAE6 165 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 HSPBAP1Q96EW2 488 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 FAIMQ9NVQ4 179 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 ZNF232Q9UNY5 417 aa17.4■□□□□ 0.38
LITAF-209ENST00000571688 E9PBE3 544 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 EXTL3O43909 919 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 LRCH4O75427 683 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 LSM8O95777 96 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 TOP3BO95985 862 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 TBXAS1P24557 533 aaPredicted RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 VARSP26640 1264 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 SLC1A6P48664 564 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 PEX6Q13608 980 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 ADGRE1Q14246 886 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 IYDQ6PHW0 289 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 TRMT1LQ7Z2T5 733 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 BBS5Q8N3I7 341 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 CATSPER1Q8NEC5 780 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 PRPF31Q8WWY3 499 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 FAM96AQ9H5X1 160 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 AGO4Q9HCK5 861 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 SLC9A2Q9UBY0 812 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 ZC3H7BQ9UGR2 993 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 GH2P01242 217 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 ALOX15P16050 662 aaPredicted RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 PRDX6P30041 224 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 MTA1Q13330 715 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 ERI1Q8IV48 349 aaKnown RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.37
LITAF-209ENST00000571688 FAF2Q96CS3 445 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 PHF12Q96QT6 1004 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 PCDH18Q9HCL0 1135 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 TMOD2Q9NZR1 351 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 RIMS3Q9UJD0 308 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 ARHGAP26Q9UNA1 814 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 NUB1Q9Y5A7 615 aa17.39■□□□□ 0.37
LITAF-209ENST00000571688 CRKP46108 304 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 GABRB2P47870 512 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 COG7P83436 770 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 LRRC8BQ6P9F7 803 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 NIPA1Q7RTP0 329 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 RSPH3Q86UC2 560 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 RFX6Q8HWS3 928 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 ARHGAP28Q9P2N2 729 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 APOEP02649 317 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 PSMA2P25787 234 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 ABCD1P33897 745 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 STXBP5Q5T5C0 1151 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 UBR7Q8N806 425 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 SMYD1Q8NB12 490 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 ADCY4Q8NFM4 1077 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 LRGUKQ96M69 825 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 SLC2A11Q9BYW1 496 aa17.38■□□□□ 0.37
LITAF-209ENST00000571688 FRMD8Q9BZ67 464 aaPredicted RBP17.38■□□□□ 0.37
LITAF-209ENST00000571688 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
LITAF-209ENST00000571688 LOC100653049A0A140TA62 436 aa17.37■□□□□ 0.37
LITAF-209ENST00000571688 ZNF195O14628 629 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms