RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 C2CD6Q53TS8 623 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 CT47A1Q5JQC4 288 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 RAB41Q5JT25 222 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 BSPRYQ5W0U4 402 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 HEATR6Q6AI08 1181 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 FSTL4Q6MZW2 842 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 LUZP1Q86V48 1076 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 RALGPS2Q86X27 583 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 TMEM25Q86YD3 366 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 DENND1CQ8IV53 801 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 FMNL3Q8IVF7 1028 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 SFTPA1Q8IWL2 248 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 C1orf131Q8NDD1 294 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC35F5Q8WV83 523 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 SHC3Q92529 594 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM149B1Q96BN6 582 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 KLF16Q9BXK1 252 aaPredicted RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 C2orf42Q9NWW7 574 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 MARCH2Q9P0N8 246 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 COX16Q9P0S2 106 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 R4GN57 208 aa9.46□□□□□ -0.9
GTF3C1-210ENST00000569394 ZNF318Q5VUA4 2279 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GTPBP10A4D1E9 387 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 E5RJQ4 531 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 TEX33O43247 280 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 LAMTOR5O43504 91 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NFATC1O95644 943 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 CHRNB1P11230 501 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 UCHL3P15374 230 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GPD2P43304 727 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 PXNP49023 591 aaPredicted RBP9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NUMBP49757 651 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 PTPN5P54829 565 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 DAOAP59103 153 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SATB1Q01826 763 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA8FQ08AF8 430 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA8DPQ0D2H9 430 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 MESP2Q0VG99 397 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GRSF1Q12849 480 aaKnown RBP eCLIP9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 FZD5Q13467 585 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 TAF5Q15542 800 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 ZSCAN23Q3MJ62 389 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 C2orf27AQ580R0 203 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 LY6G5CQ5SRR4 150 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 OR6B2Q6IFH4 312 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 DPY19L2P1Q6NXN4 242 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 PKN3Q6P5Z2 889 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 RHBDF2Q6PJF5 856 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 ENOSF1Q7L5Y1 443 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 C12orf40Q86WS4 652 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 C1orf210Q8IVY1 113 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 ADGRG2Q8IZP9 1017 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NEK11Q8NG66 645 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC20A1Q8WUM9 679 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 GOLGA1Q92805 767 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 CD101Q93033 1021 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NELL2Q99435 816 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 P2RY13Q9BPV8 354 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 HSD3B7Q9H2F3 369 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 PNPLA8Q9NP80 782 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 TRPV5Q9NQA5 729 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SEPT11Q9NVA2 429 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 DLGAP2Q9P1A6 1054 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 LIMA1Q9UHB6 759 aaKnown RBP9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 NAALADL1Q9UQQ1 740 aa9.45□□□□□ -0.9
GTF3C1-210ENST00000569394 SOBPA7XYQ1 873 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 SLC9A3R1O14745 358 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 CAPN9O14815 690 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 RNF40O75150 1001 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 STC2O76061 302 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 MOCS2O96007 188 aaPredicted RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 SERPINC1P01008 464 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 KLKB1P03952 638 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 MMEP08473 750 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 ADH5P11766 374 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 NCAM1P13591 858 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 CORO1AP31146 461 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 TUBP50607 506 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 RNASE9P60153 205 aaKnown RBP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 PDCLQ13371 301 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 GAS6Q14393 721 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 STILQ15468 1287 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 EMC10Q5UCC4 262 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 BHLHA9Q7RTU4 235 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 TADA2BQ86TJ2 420 aa9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 DDX42Q86XP3 938 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF3C1-210ENST00000569394 PARP9Q8IXQ6 854 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms