RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 LRRC4Q9HBW1 653 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 FBRSL1Q9HCM7 1045 aaKnown RBP15.2■□□□□ 0.02
COMMD4-225ENST00000569245 UBE2TQ9NPD8 197 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-225ENST00000569245 CYLDQ9NQC7 956 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 ZSCAN32Q9NX65 697 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 DNMT3LQ9UJW3 386 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 NUDT5Q9UKK9 219 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 USP3Q9Y6I4 520 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 COL4A2P08572 1712 aa15.2■□□□□ 0.02
COMMD4-225ENST00000569245 GREB1Q4ZG55 1949 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 MIA3Q5JRA6 1907 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 OBSL1O75147 1896 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 PRR23AA6NEV1 266 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 AKR1B15C9JRZ8 316 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 XPO1O14980 1071 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 MDM4O15151 490 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 ATG13O75143 517 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 ADH1CP00326 375 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 LMNAP02545 664 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 CYP17A1P05093 508 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 UCHL3P15374 230 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 ZBED6P86452 979 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 RSRC2Q7L4I2 434 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 SCD5Q86SK9 330 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 MIB1Q86YT6 1006 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 CNGA4Q8IV77 575 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 RBBP8NLQ8NC74 664 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 CDK5RAP1Q96SZ6 601 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 FAM126AQ9BYI3 521 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 LSM7Q9UK45 103 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
COMMD4-225ENST00000569245 PCDHGA2Q9Y5H1 932 aa15.19■□□□□ 0.02
COMMD4-225ENST00000569245 WDR87Q6ZQQ6 2873 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 ZNF638Q14966 1978 aaKnown RBP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 DENND4CQ5VZ89 1909 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 RNF225M0QZC1 329 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 TULP2O00295 520 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 O00370 1275 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 MFAP3LO75121 409 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 RNF40O75150 1001 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 ZBED1O96006 694 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 CALCAP01258 141 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 SETSIPP0DME0 302 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 BRD2P25440 801 aaKnown RBP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 POLR2FP61218 127 aaKnown RBP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 YWHAGP61981 247 aaKnown RBP eCLIP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 APBA1Q02410 837 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 ANO4Q32M45 955 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 FBXO43Q4G163 708 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 BTBD8Q5XKL5 378 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 SMYD5Q6GMV2 418 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 RHBDF2Q6PJF5 856 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 LCLAT1Q6UWP7 414 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 BBS7Q8IWZ6 715 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 SIX6OS1Q8N1H7 587 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 TC2NQ8N9U0 490 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 CPLX3Q8WVH0 158 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 TFAP2BQ92481 460 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 BAP1Q92560 729 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 OTUB2Q96DC9 234 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-225ENST00000569245 ULBP1Q9BZM6 244 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 CLIC5Q9NZA1 410 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 RASAL2Q9UJF2 1139 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 MYO6Q9UM54 1294 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 DMDP11532 3685 aa15.18■□□□□ 0.02
COMMD4-225ENST00000569245 CACNA1IQ9P0X4 2223 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 M0QYV0 167 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 PTMAP06454 111 aaKnown RBP15.17■□□□□ 0.02
COMMD4-225ENST00000569245 ADH5P11766 374 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 LCP1P13796 627 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 KRT9P35527 623 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 USP8P40818 1118 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 MFAP3P55082 362 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
COMMD4-225ENST00000569245 GAD2Q05329 585 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 ADIGQ0VDE8 80 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 STILQ15468 1287 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 CNGA2Q16280 664 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 RAB41Q5JT25 222 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 LY6G5CQ5SRR4 150 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 HEATR6Q6AI08 1181 aaKnown RBP15.17■□□□□ 0.02
COMMD4-225ENST00000569245 KLHDC10Q6PID8 442 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 CACNA2D4Q7Z3S7 1137 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
COMMD4-225ENST00000569245 CCDC26Q8TAB7 109 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 WBP2Q969T9 261 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 DNAJC7Q99615 494 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
COMMD4-225ENST00000569245 NUCKS1Q9H1E3 243 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms