RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	YAF2	Q8IY57	180 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	B3GNT5	Q9BYG0	378 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	TPCN1	Q9ULQ1	816 aa		4.08	□□□□□ -1.76
UBR1-209	ENST00000569243	COL15A1	P39059	1388 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	USP19	O94966	1318 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	RASSF9	O75901	435 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	PIAS2	O75928	621 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	CRYAB	P02511	175 aa	Known RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	PSG1	P11464	419 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	TNFRSF1B	P20333	461 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	ACVR2A	P27037	513 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	MCM5	P33992	734 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	HTR6	P50406	440 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	SUMO3	P55854	103 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	GPC5	P78333	572 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	RHD	Q02161	417 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	STIM1	Q13586	685 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	MFSD13A	Q14CX5	517 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	CNGA2	Q16280	664 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	PFKFB3	Q16875	520 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	EARS2	Q5JPH6	523 aa	Known RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	FBXL22	Q6P050	247 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	C18orf65	Q6ZTR6	163 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	MMP21	Q8N119	569 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	FAM71D	Q8N9W8	422 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	TMEM255B	Q8WV15	326 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	CINP	Q9BW66	212 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	HIPK2	Q9H2X6	1198 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	C1orf112	Q9NSG2	853 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	STK32B	Q9NY57	414 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	RIMKLB	Q9ULI2	386 aa		4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.07	□□□□□ -1.76
UBR1-209	ENST00000569243	NOTCH3	Q9UM47	2321 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	EME2	A4GXA9	379 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243		H7C4K7	107 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	FOXN3	O00409	490 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	SNX2	O60749	519 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	HRG	P04196	525 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	TXN	P10599	105 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	HGF	P14210	728 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	RPL17	P18621	184 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	CACNB3	P54284	484 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	TXNL4A	P83876	142 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	SLC14A1	Q13336	389 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	MTX1	Q13505	466 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	AWAT1	Q58HT5	328 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	CC2D1B	Q5T0F9	858 aa	Known RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	APOA5	Q6Q788	366 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	KCTD20	Q7Z5Y7	419 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	SDR16C5	Q8N3Y7	309 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	IGFBPL1	Q8WX77	278 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	ZBTB45	Q96K62	511 aa	Predicted RBP	4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	MSLNL	Q96KJ4	702 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	LRGUK	Q96M69	825 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	FAM204A	Q9H8W3	233 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	CPNE7	Q9UBL6	633 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	DNAJB11	Q9UBS4	358 aa		4.06	□□□□□ -1.76
UBR1-209	ENST00000569243	CFAP69	A5D8W1	941 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243		H3BNX3	289 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	SMAD6	O43541	496 aa	Known RBP	4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	TPH1	P17752	444 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	COPA	P53621	1224 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	CNN3	Q15417	329 aa	Known RBP	4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	MINDY4	Q4G0A6	757 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	DAB2IP	Q5VWQ8	1189 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	SWSAP1	Q6NVH7	229 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	GSG1L	Q6UXU4	331 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	USP49	Q70CQ1	688 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	METTL25	Q8N6Q8	603 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	WIPF2	Q8TF74	440 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	HIST1H2AA	Q96QV6	131 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	LRRC27	Q9C0I9	530 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	RXFP3	Q9NSD7	469 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	SACM1L	Q9NTJ5	587 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	ZIM2	Q9NZV7	527 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	VPS51	Q9UID3	782 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243	SQOR	Q9Y6N5	450 aa		4.05	□□□□□ -1.76
UBR1-209	ENST00000569243		B4DGG1	531 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	FYB1	O15117	783 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	INPPL1	O15357	1258 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	PRPF3	O43395	683 aa	Known RBP	4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	BRAF	P15056	766 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	BTF3	P20290	206 aa	Known RBP	4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	CPA2	P48052	419 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	EIF4A1	P60842	406 aa	Known RBP	4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	YPEL5	P62699	121 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	FMO1	Q01740	532 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	DEUP1	Q05D60	604 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	DNASE1L3	Q13609	305 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	POLD3	Q15054	466 aa	Predicted RBP	4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	ODR4	Q5SWX8	454 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	PLAG1	Q6DJT9	500 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	NXN	Q6DKJ4	435 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	COLCA1	Q6ZS62	124 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	SRGAP1	Q7Z6B7	1085 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	ADHFE1	Q8IWW8	467 aa		4.04	□□□□□ -1.76
UBR1-209	ENST00000569243	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.04	□□□□□ -1.76

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