RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RASAL3Q86YV0 1011 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 LRTOMTQ8WZ04 291 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 GLG1Q92896 1179 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 MOGAT1Q96PD6 335 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 HAPLN3Q96S86 360 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 MAF1Q9H063 256 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 CPNE5Q9HCH3 593 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 SACM1LQ9NTJ5 587 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 SERTAD4Q9NUC0 356 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 TFCP2L1Q9NZI6 479 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 COL20A1Q9P218 1284 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 TPCN1Q9ULQ1 816 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 C5P01031 1676 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 USP6P35125 1406 aa4.03□□□□□ -1.76
HMGB1P6-201ENST00000569046 EIF3AQ14152 1382 aaKnown RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ITGB4P16144 1822 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 SLIT3O75094 1523 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 TRIM43BA6NCK2 446 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 SLC16A3O15427 465 aaKnown RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 VNN1O95497 513 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 FESP07332 822 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 EBLN1P0CF75 366 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 CYP2C9P11712 490 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 BRAFP15056 766 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 RHCEP18577 417 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 WT1P19544 449 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 DRD4P21917 467 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 PEX2P28328 305 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 LRPAP1P30533 357 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 CACNB3P54284 484 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ELLP55199 621 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 PROK1P58294 105 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 RPS16P62249 146 aaKnown RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 RHDQ02161 417 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 RAB32Q13637 225 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 CNGA2Q16280 664 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 LY6KQ17RY6 165 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 KIAA0753Q2KHM9 967 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 DEPDC1Q5TB30 811 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 DPY19L2P1Q6NXN4 242 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 SESTD1Q86VW0 696 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 DGKHQ86XP1 1220 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 BPIFB1Q8TDL5 484 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF384Q8TF68 577 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ATRIPQ8WXE1 791 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 TRIM43Q96BQ3 446 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 SARAFQ96BY9 339 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 NMD3Q96D46 503 aaKnown RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 LTV1Q96GA3 475 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 APIPQ96GX9 242 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF518BQ9C0D4 1074 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 ARHGEF3Q9NR81 526 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 TERF2IPQ9NYB0 399 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 DLL3Q9NYJ7 618 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 PTGFRNQ9P2B2 879 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 PCDHGB6Q9Y5F9 930 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 SNX14Q9Y5W7 946 aa4.02□□□□□ -1.77
HMGB1P6-201ENST00000569046 KIAA1210Q9ULL0 1709 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 USP54Q70EL1 1684 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 A1L4Q6 167 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 ISM1B1AKI9 464 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 H0YIZ8 118 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 PYCARD-AS1I3L0S3 204 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 GOLIM4O00461 696 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 ORC4O43929 436 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 TLR5O60602 858 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 PPFIA2O75334 1257 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 WDHD1O75717 1129 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 CENPBP07199 599 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 CCT8P50990 548 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 FAM193AP78312 1265 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 KRT17Q04695 432 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 SEMA5AQ13591 1074 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 POLD3Q15054 466 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 MGAT5BQ3V5L5 792 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 DARS2Q6PI48 645 aaKnown RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF551Q7Z340 670 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 KCTD20Q7Z5Y7 419 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 SLC15A3Q8IY34 581 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 TMEM171Q8WVE6 324 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 PPP2R3CQ969Q6 453 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 R3HDM4Q96D70 268 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 SUCLG2Q96I99 432 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 APOL5Q9BWW9 433 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 A1CFQ9NQ94 594 aaKnown RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 AFF4Q9UHB7 1163 aaKnown RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 TAGLN3Q9UI15 199 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 TRPM1Q7Z4N2 1603 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 CPSF1Q10570 1443 aaKnown RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 TOGARAM1Q9Y4F4 1720 aa4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 BRD4O60885 1362 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P6-201ENST00000569046 AOX1Q06278 1338 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 GOLGB1Q14789 3259 aaKnown RBP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 F8W8V4 182 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF213O14771 459 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 RBMXL2O75526 392 aaKnown RBP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 NXPH3O95157 252 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms