RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	WDR5B	Q86VZ2	330 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	TTC30A	Q86WT1	665 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	NAT16	Q8N8M0	369 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	ANKRD20A12P	Q8NF67	263 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	TSTD1	Q8NFU3	115 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	KCNV2	Q8TDN2	545 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	KCTD13	Q8WZ19	329 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	ZFR	Q96KR1	1074 aa	Known RBP	10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	HSFY1	Q96LI6	401 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	ULBP1	Q9BZM6	244 aa		10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	POLM	Q9NP87	494 aa	Predicted RBP	10.87	□□□□□ -0.67
UBR1-207	ENST00000568782	VPS13A	Q96RL7	3174 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	FAM186A	A6NE01	2351 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	AXIN1	O15169	862 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	HOXC11	O43248	304 aa	Predicted RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	THAP12	O43422	761 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	FOXD2	O60548	495 aa	Predicted RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	RPP40	O75818	363 aa	Known RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	LETM1	O95202	739 aa	Predicted RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	HMBS	P08397	361 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TYR	P14679	529 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	SDHB	P21912	280 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	BRD2	P25440	801 aa	Known RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TIE1	P35590	1138 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	OPRD1	P41143	372 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	DGKE	P52429	567 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	ZNF445	P59923	1031 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	PTK2	Q05397	1052 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	KDSR	Q06136	332 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	BYSL	Q13895	437 aa	Known RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	ARHGAP44	Q17R89	818 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	USP39	Q53GS9	565 aa	Known RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	BSPRY	Q5W0U4	402 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TRIM65	Q6PJ69	517 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	C11orf74	Q86VG3	221 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TMEM25	Q86YD3	366 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	ARHGEF19	Q8IW93	802 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	KIAA2013	Q8IYS2	634 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	SUMF1	Q8NBK3	374 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	LMO3	Q8TAP4	145 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	UCMA	Q8WVF2	138 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	IRGQ	Q8WZA9	623 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	PLD4	Q96BZ4	506 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	NOX5	Q96PH1	765 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TUBGCP2	Q9BSJ2	902 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	CRACR2A	Q9BSW2	395 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	PDCL3	Q9H2J4	239 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	DNAJC17	Q9NVM6	304 aa	Known RBP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	OSER1	Q9NX31	292 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	APEX2	Q9UBZ4	518 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	CEP83	Q9Y592	693 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	KIAA1549L	Q6ZVL6	1849 aa		10.86	□□□□□ -0.67
UBR1-207	ENST00000568782	TYW5	A2RUC4	315 aa	Known RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782		K7EQS6	105 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782		K7ESF4	209 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	CAPN9	O14815	690 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	MDM4	O15151	490 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	TULP3	O75386	442 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	STC2	O76061	302 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	MBD3	O95983	291 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	TDGF1	P13385	188 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	GNA15	P30679	374 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	CORO1A	P31146	461 aa	Known RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	SLC6A11	P48066	632 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	DGKG	P49619	791 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	PGF	P49763	221 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	RGS7	P49802	495 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	BPIFB4	P59827	614 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	ARID5A	Q03989	594 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	ELF2	Q15723	593 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	LPAL2	Q16609	132 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	VWA3B	Q502W6	1294 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	C10orf76	Q5T2E6	689 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	SMYD5	Q6GMV2	418 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	CACNA2D4	Q7Z3S7	1137 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	SCD5	Q86SK9	330 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	DENND1C	Q8IV53	801 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	UNC45B	Q8IWX7	931 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	SCML4	Q8N228	414 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	PGBD3	Q8N328	593 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	CCDC33	Q8N5R6	958 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	UBR7	Q8N806	425 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	TXNDC5	Q8NBS9	432 aa	Known RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	USP33	Q8TEY7	942 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	DDI1	Q8WTU0	396 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	SLC35F5	Q8WV83	523 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	GAB3	Q8WWW8	586 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	FAM149B1	Q96BN6	582 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	HHIP	Q96QV1	700 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	MED15	Q96RN5	788 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	DDX50	Q9BQ39	737 aa	Known RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	NDST4	Q9H3R1	872 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	LMBRD1	Q9NUN5	540 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	MMP17	Q9ULZ9	603 aa		10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	USP18	Q9UMW8	372 aa		10.85	□□□□□ -0.67

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