RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 NAT16Q8N8M0 369 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 RMDN1Q96DB5 314 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 ULBP1Q9BZM6 244 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 LRRC4Q9HBW1 653 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 PARD6AQ9NPB6 346 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 WDR35Q9P2L0 1181 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 EBF1Q9UH73 591 aa15.16■□□□□ 0.02
CMTM3-215ENST00000568477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
CMTM3-215ENST00000568477 A0A0A0MRY4 1105 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 NEDD8-MDP1E9PL57 170 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 TULP2O00295 520 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 STC2O76061 302 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 KLF8O95600 359 aaPredicted RBP15.15■□□□□ 0.02
CMTM3-215ENST00000568477 MBD3O95983 291 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 ZBED1O96006 694 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 TGM1P22735 817 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 COG7P83436 770 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 EFEMP1Q12805 493 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 PM20D1Q6GTS8 502 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 GRAMD4Q6IC98 578 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 Q6ZNB5 142 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 NUDT18Q6ZVK8 323 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 PHTF2Q8N3S3 785 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 ALLCQ8N6M5 410 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 EHBP1Q8NDI1 1231 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 LMO3Q8TAP4 145 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 UBA3Q8TBC4 463 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 KAT5Q92993 513 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 XPO6Q96QU8 1125 aaKnown RBP15.15■□□□□ 0.02
CMTM3-215ENST00000568477 BBS2Q9BXC9 721 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 DNAJC17Q9NVM6 304 aaKnown RBP15.15■□□□□ 0.02
CMTM3-215ENST00000568477 MARK1Q9P0L2 795 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 RWDD2AQ9UIY3 292 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 STRIP2Q9ULQ0 834 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 ZNF510Q9Y2H8 683 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 DMXL1Q9Y485 3027 aa15.15■□□□□ 0.02
CMTM3-215ENST00000568477 ANTXRLA6NF34 631 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 PRR5-ARHGAP8B1AHC4 643 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 CACNG3O60359 315 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 HMBSP08397 361 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 TIE1P35590 1138 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
CMTM3-215ENST00000568477 DGKEP52429 567 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 ARHGAP8P85298 464 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 GCNT1Q02742 428 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 ADIGQ0VDE8 80 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 PUM1Q14671 1186 aaKnown RBP eCLIP15.14■□□□□ 0.01
CMTM3-215ENST00000568477 CRY1Q16526 586 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 EOGTQ5NDL2 527 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 C10orf76Q5T2E6 689 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 ANO7Q6IWH7 933 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 LCLAT1Q6UWP7 414 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 TPGS1Q6ZTW0 290 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 RRAGAQ7L523 313 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 KBTBD6Q86V97 674 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 ARHGEF19Q8IW93 802 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 SIX6OS1Q8N1H7 587 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 TERB1Q8NA31 727 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 IL17RCQ8NAC3 791 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 TXNDC5Q8NBS9 432 aaKnown RBP15.14■□□□□ 0.01
CMTM3-215ENST00000568477 RBBP8NLQ8NC74 664 aaPredicted RBP15.14■□□□□ 0.01
CMTM3-215ENST00000568477 TFAP2BQ92481 460 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 LOXL4Q96JB6 756 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 DCLK3Q9C098 648 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
CMTM3-215ENST00000568477 MARCH2Q9P0N8 246 aa15.14■□□□□ 0.01
CMTM3-215ENST00000568477 ALDH1A2O94788 518 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 CHRM1P11229 460 aaPredicted RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 TYRP14679 529 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 SDHBP21912 280 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 BRD2P25440 801 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 STILQ15468 1287 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 CNGA2Q16280 664 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 CSRP2Q16527 193 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 PKDCCQ504Y2 493 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 EMC10Q5UCC4 262 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 ERMP1Q7Z2K6 904 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 TRMT11Q7Z4G4 463 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 KCNV2Q8TDN2 545 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 KCTD13Q8WZ19 329 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 NDRG1Q92597 394 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 CNOT6LQ96LI5 555 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 OLA1Q9NTK5 396 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 SEMA4GQ9NTN9 838 aa15.13■□□□□ 0.01
CMTM3-215ENST00000568477 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 MYO18AQ92614 2054 aaKnown RBP15.13■□□□□ 0.01
CMTM3-215ENST00000568477 SPTBN2O15020 2390 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 SLC12A8A0AV02 714 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 M0QYV0 167 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 RNF225M0QZC1 329 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 SGK1O00141 431 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 TRIM24O15164 1050 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 FOXD2O60548 495 aaPredicted RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 EPN2O95208 641 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 KLKB1P03952 638 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 CORO1AP31146 461 aaKnown RBP15.12■□□□□ 0.01
CMTM3-215ENST00000568477 ZNF132P52740 706 aa15.12■□□□□ 0.01
CMTM3-215ENST00000568477 FOXK2Q01167 660 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms