RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DRG1Q9Y295 367 aaKnown RBP15.25■□□□□ 0.03
COMMD4-221ENST00000567935 TSC2P49815 1807 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 VPS13AQ96RL7 3174 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 ATG2AQ2TAZ0 1938 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 GOLGA6BA6NDN3 693 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 C3orf70A6NLC5 250 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 MDM4O15151 490 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 HCRTO43612 131 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 TBX10O75333 385 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 DAB1O75553 588 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 TCF4P15884 667 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 ACAT1P24752 427 aaKnown RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 NBL1P41271 181 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 TSPY1Q01534 308 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CALCOCO2Q13137 446 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CCDC14Q49A88 953 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CFAP58Q5T655 872 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 FAM171BQ6P995 826 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CEP128Q6ZU80 1094 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 PAQR9Q6ZVX9 377 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 PSTKQ8IV42 348 aaKnown RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 SCUBE3Q8IX30 993 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 SIX6OS1Q8N1H7 587 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 SCML4Q8N228 414 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 KCTD6Q8NC69 237 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 FAM71BQ8TC56 605 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 C1orf54Q8WWF1 131 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 LINC01599Q8WXQ3 324 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CENPIQ92674 756 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 FAM193BQ96PV7 902 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 RUFY1Q96T51 708 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 FMO2Q99518 471 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 HEMGNQ9BXL5 484 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 B3GNT5Q9BYG0 378 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 ZWILCHQ9H900 591 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 CNGB3Q9NQW8 809 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 RRN3Q9NYV6 651 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.24■□□□□ 0.03
COMMD4-221ENST00000567935 INSL6Q9Y581 213 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 MYO7AQ13402 2215 aa15.24■□□□□ 0.03
COMMD4-221ENST00000567935 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 LIASO43766 372 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 OPA1O60313 960 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 AP1G2O75843 785 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 GABBR2O75899 941 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 ENDOD1O94919 500 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 LCP1P13796 627 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 ITIH2P19823 946 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 IL1R2P27930 398 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 MATKP42679 507 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 HTRA4P83105 476 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-221ENST00000567935 KRT17Q04695 432 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 SIGLEC14Q08ET2 396 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 HYAL1Q12794 435 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 ATP13A4Q4VNC1 1196 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CLLU1OSQ5K130 101 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 OVOS1Q6IE37 1185 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CD300LGQ6UXG3 332 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CLEC20AQ6ZU45 233 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 FAM172AQ8WUF8 416 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 IRGQQ8WZA9 623 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 PCED1BQ96HM7 432 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 HERPUD2Q9BSE4 406 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 C11orf84Q9BUA3 381 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-221ENST00000567935 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
COMMD4-221ENST00000567935 DPH5Q9H2P9 285 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CSNK1G1Q9HCP0 422 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 NGRNQ9NPE2 291 aaKnown RBP15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 STAP1Q9ULZ2 295 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 PCDHB7Q9Y5E2 793 aa15.23■□□□□ 0.03
COMMD4-221ENST00000567935 CACNA1GO43497 2377 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 DNAH14Q0VDD8 3507 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ENPP3O14638 875 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 SYN3O14994 580 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ATP2C2O75185 946 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 PDGFBP01127 241 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ITGAVP06756 1048 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 NOS2P35228 1153 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ARSEP51690 589 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 FAM193AP78312 1265 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ADCY1Q08828 1119 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ADIGQ0VDE8 80 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 BYSLQ13895 437 aaKnown RBP15.22■□□□□ 0.03
COMMD4-221ENST00000567935 SLC25A52Q3SY17 297 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 RAB41Q5JT25 222 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 KAZNQ674X7 775 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 TRNP1Q6NT89 227 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms