RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GRM2Q14416 872 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 E4F1Q66K89 784 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 MSANTD2Q6P1R3 559 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 POTEHQ6S545 545 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 PHF13Q86YI8 300 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 MIB1Q86YT6 1006 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 DRC7Q8IY82 874 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 TTC16Q8NEE8 873 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 CPA5Q8WXQ8 436 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 EDEM1Q92611 657 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 TRIM11Q96F44 468 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 C11orf70Q9BRQ4 267 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SYT11Q9BT88 431 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-208ENST00000567250 RNF38Q9H0F5 515 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SMOC2Q9H3U7 446 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SLC2A4RGQ9NR83 387 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 SMPD4Q9NXE4 827 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 MARCH2Q9P0N8 246 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 TBC1D14Q9P2M4 693 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 STAP1Q9ULZ2 295 aa12.73□□□□□ -0.37
SF3B3-208ENST00000567250 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 GABBR2O75899 941 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 GZMAP12544 262 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 PGFP49763 221 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 TBX2Q13207 712 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-208ENST00000567250 NNTQ13423 1086 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 PDGFRLQ15198 375 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 HGSNATQ68CP4 663 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 ZNF571Q7Z3V5 609 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-208ENST00000567250 XYLT1Q86Y38 959 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 CSGALNACT1Q8TDX6 532 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 NDRG1Q92597 394 aaKnown RBP12.72□□□□□ -0.37
SF3B3-208ENST00000567250 PLD4Q96BZ4 506 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 OTUB2Q96DC9 234 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 DCLK3Q9C098 648 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 RRN3Q9NYV6 651 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 CFAP97Q9P2B7 532 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 TJP2Q9UDY2 1190 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 HBS1LQ9Y450 684 aaKnown RBP12.72□□□□□ -0.37
SF3B3-208ENST00000567250 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
SF3B3-208ENST00000567250 SSU72P8A0A1W2PR75 194 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ANKRD62A6NC57 917 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ADCY5O95622 1261 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 TBX18O95935 607 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 IRF1P10914 325 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 SKILP12757 684 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 DESP17661 470 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ZXDAP98168 799 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 C1orf228Q6PIY5 440 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 HFE2Q6ZVN8 426 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 MON1BQ7L1V2 547 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ARCQ7LC44 396 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 CPA6Q8N4T0 437 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 C3orf20Q8ND61 904 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ST13P5Q8NFI4 369 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 SLC30A5Q8TAD4 765 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 OSCP1Q8WVF1 389 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ATP2A3Q93084 1043 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 RSPRY1Q96DX4 576 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 VCPIP1Q96JH7 1222 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 SLC2A13Q96QE2 648 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 PCDHB18PQ96TA0 734 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 RPP25Q9BUL9 199 aaKnown RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 KLF16Q9BXK1 252 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 PLA2G2FQ9BZM2 168 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 TRPV5Q9NQA5 729 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 NUDT5Q9UKK9 219 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 FBXL21Q9UKT6 434 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 ZNF510Q9Y2H8 683 aa12.71□□□□□ -0.37
SF3B3-208ENST00000567250 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-208ENST00000567250 KIAA1549LQ6ZVL6 1849 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 SLC12A8A0AV02 714 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 GOLGA8SH3BPF8 625 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 DDX3XO00571 662 aaKnown RBP eCLIP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 MDM4O15151 490 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 RTN2O75298 545 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 NFATC1O95644 943 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 MYBL1P10243 752 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 GBP1P32455 592 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 NOS2P35228 1153 aa12.7□□□□□ -0.38
SF3B3-208ENST00000567250 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
SF3B3-208ENST00000567250 CDK17Q00537 523 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms