RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 ITGB1BP2Q9UKP3 347 aa25.89■■□□□ 1.74
FANCA-221ENST00000566889 GNEQ9Y223 722 aaKnown RBP25.89■■□□□ 1.74
FANCA-221ENST00000566889 RGPD3A6NKT7 1758 aaPredicted RBP25.89■■□□□ 1.73
FANCA-221ENST00000566889 RGPD4Q7Z3J3 1758 aa25.89■■□□□ 1.73
FANCA-221ENST00000566889 CXorf49A8MYA2 514 aaPredicted RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 ZNF23P17027 643 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 GABRB2P47870 512 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 SLC1A6P48664 564 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 IDH3AP50213 366 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 TBC1D10BQ4KMP7 808 aaPredicted RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 FSCBQ5H9T9 825 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 MBLAC2Q68D91 279 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 NCCRP1Q6ZVX7 275 aaPredicted RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 PPP4R1Q8TF05 950 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 ARHGEF1Q92888 912 aaKnown RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 IFT122Q9HBG6 1241 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 KMT5AQ9NQR1 393 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 HOMER2Q9NSB8 354 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 PI4KBQ9UBF8 816 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 PCDHGB4Q9UN71 923 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 PCDHGB5Q9Y5G0 923 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 ITM2AO43736 263 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 C4BPAP04003 597 aaKnown RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 KDELR1P24390 212 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 HADHQ16836 314 aaKnown RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 HHIPL2Q6UWX4 724 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 TIFABQ6ZNK6 161 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 FRMD7Q6ZUT3 714 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 FAM213AQ9BRX8 229 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 ZC3H7BQ9UGR2 993 aaKnown RBP25.88■■□□□ 1.73
FANCA-221ENST00000566889 SQORQ9Y6N5 450 aa25.88■■□□□ 1.73
FANCA-221ENST00000566889 WDR46O15213 610 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 CAPNS1P04632 268 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 NFIAQ12857 509 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 POTEHQ6S545 545 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 ZNF606Q8WXB4 792 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 SLC2A11Q9BYW1 496 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 INO80BQ9C086 356 aaPredicted RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 POLLQ9UGP5 575 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 RIMS3Q9UJD0 308 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 MRPL11Q9Y3B7 192 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 KANSL1LA0AUZ9 987 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 DKC1O60832 514 aaKnown RBP eCLIP25.87■■□□□ 1.73
FANCA-221ENST00000566889 RBP3P10745 1247 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 COX4I1P13073 169 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 YWHAZP63104 245 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 SLC25A11Q02978 314 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 BMPR2Q13873 1038 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 PSMD6Q15008 389 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 SPOPLQ6IQ16 392 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 VPS50Q96JG6 964 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 NTPCRQ9BSD7 190 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 SLC9A2Q9UBY0 812 aa25.87■■□□□ 1.73
FANCA-221ENST00000566889 CNOT11Q9UKZ1 510 aaKnown RBP25.87■■□□□ 1.73
FANCA-221ENST00000566889 SERPINB2P05120 415 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 EIF4BP23588 611 aaKnown RBP25.86■■□□□ 1.73
FANCA-221ENST00000566889 CD151P48509 253 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 STAT2P52630 851 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 NUP107P57740 925 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 TDRD10Q5VZ19 366 aaKnown RBP25.86■■□□□ 1.73
FANCA-221ENST00000566889 C4orf19Q8IY42 314 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 SLC35B4Q969S0 331 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 FAF2Q96CS3 445 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 TRIM56Q9BRZ2 755 aaKnown RBP25.86■■□□□ 1.73
FANCA-221ENST00000566889 ZNF518BQ9C0D4 1074 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 POPDC2Q9HBU9 364 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 HERC5Q9UII4 1024 aaKnown RBP25.86■■□□□ 1.73
FANCA-221ENST00000566889 ZNF711Q9Y462 761 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 STRCQ7RTU9 1775 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 APOEP02649 317 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 CNTFP26441 200 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 ZFPM1Q8IX07 1006 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 LRRC39Q96DD0 335 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 SYNPO2Q9UMS6 1093 aa25.86■■□□□ 1.73
FANCA-221ENST00000566889 DHX15O43143 795 aaKnown RBP25.85■■□□□ 1.73
FANCA-221ENST00000566889 FGF3P11487 239 aaPredicted RBP25.85■■□□□ 1.73
FANCA-221ENST00000566889 TNNI1P19237 187 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 GRK2P25098 689 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 PSMD7P51665 324 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 ABCB5Q2M3G0 1257 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 APOBEC3HQ6NTF7 200 aaKnown RBP25.85■■□□□ 1.73
FANCA-221ENST00000566889 ADGRF2Q8IZF7 708 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 TMEM35BQ8NCS4 154 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 SLX1AQ9BQ83 275 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 KIFC3Q9BVG8 833 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 OSBPL6Q9BZF3 934 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 RRN3Q9NYV6 651 aa25.85■■□□□ 1.73
FANCA-221ENST00000566889 KCNQ2O43526 872 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 EXTL3O43909 919 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 LYPLA1O75608 230 aaPredicted RBP25.84■■□□□ 1.73
FANCA-221ENST00000566889 ZNF189O75820 626 aaPredicted RBP25.84■■□□□ 1.73
FANCA-221ENST00000566889 SERPINE1P05121 402 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 ALDH3B2P48448 385 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 ROR1Q01973 937 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 PDAP1Q13442 181 aaKnown RBP25.84■■□□□ 1.73
FANCA-221ENST00000566889 PDCD4Q53EL6 469 aaKnown RBP25.84■■□□□ 1.73
FANCA-221ENST00000566889 NIPA1Q7RTP0 329 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 MAVSQ7Z434 540 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 RFX6Q8HWS3 928 aa25.84■■□□□ 1.73
FANCA-221ENST00000566889 TSPAN14Q8NG11 270 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms