RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 PIK3R2O00459 728 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 DCXO43602 365 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 RTN2O75298 545 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 DAB1O75553 588 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 MYBL1P10243 752 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 ZNF77Q15935 545 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 ARHGAP29Q52LW3 1261 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 TANGO2Q6ICL3 276 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 RNF135Q8IUD6 432 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 GPIHBP1Q8IV16 184 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 YAF2Q8IY57 180 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 SLC30A5Q8TAD4 765 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 SERPINB11Q96P15 392 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 RNF38Q9H0F5 515 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 DEF6Q9H4E7 631 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 ARHGAP20Q9P2F6 1191 aa21.23■□□□□ 0.99
RNF40-210ENST00000566811 SLC9A3R1O14745 358 aaPredicted RBP21.22■□□□□ 0.99
RNF40-210ENST00000566811 SKILP12757 684 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 NCAM1P13591 858 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 ADKP55263 362 aaKnown RBP21.22■□□□□ 0.99
RNF40-210ENST00000566811 PFKPQ01813 784 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 MTA1Q13330 715 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 FAM102AQ5T9C2 384 aaPredicted RBP21.22■□□□□ 0.99
RNF40-210ENST00000566811 WDR59Q6PJI9 974 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 POTEHQ6S545 545 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 MMS22LQ6ZRQ5 1243 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 TC2NQ8N9U0 490 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 OLIG1Q8TAK6 271 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 CLEC4CQ8WTT0 213 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 SLC2A13Q96QE2 648 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 SLC22A12Q96S37 553 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 C11orf70Q9BRQ4 267 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 SMOC2Q9H3U7 446 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 TRPV5Q9NQA5 729 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 MARCH2Q9P0N8 246 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 LSM7Q9UK45 103 aaKnown RBP21.22■□□□□ 0.99
RNF40-210ENST00000566811 DUSP12Q9UNI6 340 aa21.22■□□□□ 0.99
RNF40-210ENST00000566811 HBS1LQ9Y450 684 aaKnown RBP21.22■□□□□ 0.99
RNF40-210ENST00000566811 E2F8A0AVK6 867 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 DDX3XO00571 662 aaKnown RBP eCLIP21.21■□□□□ 0.996e-9■■□□□ 13.9
RNF40-210ENST00000566811 SRFP11831 508 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 PGFP49763 221 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 MRE11P49959 708 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 MTF1Q14872 753 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 SLC18A3Q16572 532 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 CC2D1AQ6P1N0 951 aaPredicted RBP21.21■□□□□ 0.99
RNF40-210ENST00000566811 VITQ6UXI7 678 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 C3orf20Q8ND61 904 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 SH3RF2Q8TEC5 729 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 DNASE1L2Q92874 299 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 IRF7Q92985 503 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 PLD4Q96BZ4 506 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 OTUB2Q96DC9 234 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 ZFRQ96KR1 1074 aaKnown RBP21.21■□□□□ 0.99
RNF40-210ENST00000566811 CYP2S1Q96SQ9 504 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 KXD1Q9BQD3 176 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.21■□□□□ 0.99
RNF40-210ENST00000566811 TRMT61BQ9BVS5 477 aaKnown RBP21.21■□□□□ 0.99
RNF40-210ENST00000566811 DCLK3Q9C098 648 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 ISCUQ9H1K1 167 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 SLC2A4RGQ9NR83 387 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 TJP2Q9UDY2 1190 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 ADAMTS1Q9UHI8 967 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 STAP1Q9ULZ2 295 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 ZNF510Q9Y2H8 683 aa21.21■□□□□ 0.99
RNF40-210ENST00000566811 ANKRD62A6NC57 917 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 LEFTY2O00292 366 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 CHADO15335 359 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 NOS2P35228 1153 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 VIPR2P41587 438 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 MATKP42679 507 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 GSDMDP57764 484 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 RING1Q06587 406 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 PTP4A2Q12974 167 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 PDGFRLQ15198 375 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 HFE2Q6ZVN8 426 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 MCOLN2Q8IZK6 566 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 SLC44A3Q8N4M1 653 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 EDEM1Q92611 657 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 ANP32BQ92688 251 aaKnown RBP21.2■□□□□ 0.98
RNF40-210ENST00000566811 CCDC42Q96M95 316 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 KLF16Q9BXK1 252 aaPredicted RBP21.2■□□□□ 0.98
RNF40-210ENST00000566811 TBC1D14Q9P2M4 693 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 RASAL2Q9UJF2 1139 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 CCL26Q9Y258 94 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 SCINQ9Y6U3 715 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 COL4A2P08572 1712 aa21.2■□□□□ 0.98
RNF40-210ENST00000566811 TICRRQ7Z2Z1 1910 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 LATS1O95835 1130 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 DESP17661 470 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 FECHP22830 423 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 EFEMP1Q12805 493 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 DNAJC24Q6P3W2 148 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 CCDC170Q8IYT3 715 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 NDRG1Q92597 394 aaKnown RBP21.19■□□□□ 0.98
RNF40-210ENST00000566811 PIWIL1Q96J94 861 aaKnown RBP21.19■□□□□ 0.98
RNF40-210ENST00000566811 SMG9Q9H0W8 520 aaKnown RBP21.19■□□□□ 0.98
RNF40-210ENST00000566811 SH3BP1Q9Y3L3 701 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 PAXBP1Q9Y5B6 917 aa21.19■□□□□ 0.98
RNF40-210ENST00000566811 ZNF263O14978 683 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms