RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 SEMG2Q02383 582 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 TEAD4Q15561 434 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 KIF19Q2TAC6 998 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 ZSWIM2Q8NEG5 633 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 WBP2Q969T9 261 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 NUP58Q9BVL2 599 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 SNX25Q9H3E2 840 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.44
CDH3-205ENST00000566808 INTS13Q9NVM9 706 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 GMIPQ9P107 970 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 PCDHGA1Q9Y5H4 931 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 SNX11Q9Y5W9 270 aa17.81■□□□□ 0.44
CDH3-205ENST00000566808 GRIA4P48058 902 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 CSNK1EP49674 416 aaKnown RBP17.8■□□□□ 0.44
CDH3-205ENST00000566808 SF3A1Q15459 793 aaKnown RBP17.8■□□□□ 0.44
CDH3-205ENST00000566808 HTR3DQ70Z44 454 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 KRI1Q8N9T8 703 aaKnown RBP17.8■□□□□ 0.44
CDH3-205ENST00000566808 RASSF8Q8NHQ8 419 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 SNX19Q92543 992 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
CDH3-205ENST00000566808 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
CDH3-205ENST00000566808 SIPA1Q96FS4 1042 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 MMS19Q96T76 1030 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 STRA6Q9BX79 667 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 SEL1LQ9UBV2 794 aa17.8■□□□□ 0.44
CDH3-205ENST00000566808 PTPRJQ12913 1337 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ERVH48-1M5A8F1 160 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 PAPSS1O43252 624 aaPredicted RBP17.79■□□□□ 0.44
CDH3-205ENST00000566808 TNNC2P02585 160 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ZDHHC11BP0C7U3 371 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 CDK4P11802 303 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 GNL1P36915 607 aaPredicted RBP17.79■□□□□ 0.44
CDH3-205ENST00000566808 KCNA1Q09470 495 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ORC1Q13415 861 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ENPP2Q13822 863 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
CDH3-205ENST00000566808 PCSK4Q6UW60 755 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 TPGS1Q6ZTW0 290 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 TMPRSS6Q8IU80 811 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 TRIM9Q9C026 710 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 CLMPQ9H6B4 373 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 OSGEPQ9NPF4 335 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 LSM7Q9UK45 103 aaKnown RBP17.79■□□□□ 0.44
CDH3-205ENST00000566808 ANKRD6Q9Y2G4 727 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 NME7Q9Y5B8 376 aa17.79■□□□□ 0.44
CDH3-205ENST00000566808 ATP8B3O60423 1300 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 GOLGA8IPA6NC78 632 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 GOLGA8JA6NMD2 632 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 SYNCRIPO60506 623 aaKnown RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 GREM1O60565 184 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 TLR5O60602 858 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 TACC1O75410 805 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 CISD3P0C7P0 127 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 ACADMP11310 421 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 JUPP14923 745 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 SLC5A3P53794 718 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 GOLGA8FQ08AF8 430 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 GOLGA8DPQ0D2H9 430 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 RTP5Q14D33 572 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 B3GALNT2Q8NCR0 500 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 OR5B17Q8NGF7 314 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 NRSN2Q9GZP1 204 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 MRPL44Q9H9J2 332 aaKnown RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 IL37Q9NZH6 218 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 CHORDC1Q9UHD1 332 aaPredicted RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 AK5Q9Y6K8 562 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 SLCO1B1Q9Y6L6 691 aa17.78■□□□□ 0.44
CDH3-205ENST00000566808 UBR5O95071 2799 aaPredicted RBP17.78■□□□□ 0.44
CDH3-205ENST00000566808 FAM92AA1XBS5 289 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 CLDN5O00501 218 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 IL12RB1P42701 662 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 E2F5Q15329 346 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 CACUL1Q86Y37 369 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 OR6B3Q8NGW1 331 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 SCAMP5Q8TAC9 235 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.44
CDH3-205ENST00000566808 CBWD1Q9BRT8 395 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 B3GNT5Q9BYG0 378 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 TM9SF3Q9HD45 589 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 DMAP1Q9NPF5 467 aaPredicted RBP17.77■□□□□ 0.44
CDH3-205ENST00000566808 THAP10Q9P2Z0 257 aaPredicted RBP17.77■□□□□ 0.44
CDH3-205ENST00000566808 SLC27A6Q9Y2P4 619 aa17.77■□□□□ 0.44
CDH3-205ENST00000566808 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.77■□□□□ 0.44
CDH3-205ENST00000566808 H0Y8X5 98 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 ARHGAP6O43182 974 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 DFNA5O60443 496 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 RFPL3O75679 317 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 C1SP09871 688 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 FAM163BP0C2L3 166 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 ACO1P21399 889 aaKnown RBP17.76■□□□□ 0.43
CDH3-205ENST00000566808 COPAP53621 1224 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 CDH8P55286 799 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 TLE3Q04726 772 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 SURF1Q15526 300 aa17.76■□□□□ 0.43
CDH3-205ENST00000566808 DUOXA2Q1HG44 320 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms