RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 C1QAP02745 245 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 VTNP04004 478 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 ITGB3P05106 788 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 SMIM10L2AP0DMW4 78 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 SMIM10L2BP0DMW5 78 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 ADAM17P78536 824 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 CDK16Q00536 496 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 CDK18Q07002 472 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 MFSD10Q14728 455 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 TAF5Q15542 800 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 KBTBD12Q3ZCT8 623 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 IGDCC3Q8IVU1 814 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 SKA1Q96BD8 255 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.41■□□□□ 0.38
CMTM3-213ENST00000566756 SETD4Q9NVD3 440 aa17.41■□□□□ 0.38
CMTM3-213ENST00000566756 TRIP12Q14669 1992 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-213ENST00000566756 GPR25O00155 361 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 HAUS5O94927 633 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 CBX6O95503 412 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 STAG3L1P0CL83 205 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 TPBGLP0DKB5 382 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PRKCHP24723 683 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 ARFIP2P53365 341 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 OSTNP61366 133 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 JADE1Q6IE81 842 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF449Q6P9G9 518 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 MCUQ8NE86 351 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 FAF2Q96CS3 445 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 ZNF668Q96K58 619 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 ITGA11Q9UKX5 1188 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 KPNA6O60684 536 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 KRT37O76014 449 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 CYBAP13498 195 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 DESP17661 470 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 EPHB2P29323 1055 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PSEN2P49810 448 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PCBP1Q15365 356 aaKnown RBP eCLIP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 SLC9A4Q6AI14 798 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 BZW1Q7L1Q6 419 aaKnown RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 TEX9Q8N6V9 391 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 RAB3IL1Q8TBN0 382 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 RXFP2Q8WXD0 754 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 PTPRN2Q92932 1015 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 SERAC1Q96JX3 654 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 MMADHCQ9H3L0 296 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-213ENST00000566756 DCLRE1BQ9H816 532 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 HMGXB4Q9UGU5 601 aa17.4■□□□□ 0.38
CMTM3-213ENST00000566756 H7C0C1 242 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 ATP5BP06576 529 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 SNRPAP09012 282 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 DLDP09622 509 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 PDGFRAP16234 1089 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 GCKP35557 465 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 CCNFP41002 786 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 ATP5OP48047 213 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 YWHAGP61981 247 aaKnown RBP eCLIP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 YWHAZP63104 245 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NAA25Q14CX7 972 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 MFSD14CQ5VZR4 134 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 LRRC6Q86X45 466 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 TMEM192Q8IY95 271 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 PLD5Q8N7P1 536 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NLRP7Q8WX94 980 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 MTBPQ96DY7 904 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NSL1Q96IY1 281 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 HEXIM2Q96MH2 286 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 BTBD10Q9BSF8 475 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 ADAM33Q9BZ11 813 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 KLC2Q9H0B6 622 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 KCNK13Q9HB14 408 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 C2CD2Q9Y426 696 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 TTLL3Q9Y4R7 772 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 WDR91A4D1P6 747 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 GOLGA8RI6L899 631 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 APOL1O14791 398 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 MDM4O15151 490 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 SERPINB4P48594 390 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NKX3-2P78367 333 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 MMRN1Q13201 1228 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 FSCN1Q16658 493 aaKnown RBP17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NPNTQ6UXI9 565 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 TRPV1Q8NER1 839 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 C7orf26Q96N11 449 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 NUDCD1Q96RS6 583 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 ZNF670Q9BS34 389 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms