RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, human

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-218	ENST00000566029	ZFPM1	Q8IX07	1006 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MAEL	Q96JY0	434 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MRO	Q9BYG7	248 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	SIAE	Q9HAT2	523 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NPHS2	Q9NP85	383 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	GID8	Q9NWU2	228 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PPARGC1A	Q9UBK2	798 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	COL5A2	P05997	1499 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ZNF142	P52746	1687 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NFASC	O94856	1347 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CAPN8	A6NHC0	703 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		H3BMQ9	156 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		M0R3G1	203 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FOXD2	O60548	495 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PRL	P01236	227 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ABCB5	Q2M3G0	1257 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CMTR1	Q8N1G2	835 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	GALNT6	Q8NCL4	622 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	LRGUK	Q96M69	825 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	COG8	Q96MW5	612 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	COPS4	Q9BT78	406 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DHRS4	Q9BTZ2	278 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PRR14	Q9BWN1	585 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NEUROD4	Q9HD90	331 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MAP3K20	Q9NYL2	800 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CNTN3	Q9P232	1028 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	SLC17A7	Q9P2U7	560 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DIP2B	Q9P265	1576 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		A0A1W2PQ67	120 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	LAD1	O00515	517 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ATP5B	P06576	529 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	RFX3	P48380	749 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NUP107	P57740	925 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	AP3B2	Q13367	1082 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ALCAM	Q13740	583 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PRKD1	Q15139	912 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	TRIP13	Q15645	432 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NANOGP8	Q6NSW7	305 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CTAGE3P	Q8IX95	158 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DCLK2	Q8N568	766 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	APPL2	Q8NEU8	664 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	IP6K1	Q92551	441 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CD101	Q93033	1021 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NKD1	Q969G9	470 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FAM89A	Q96GI7	184 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PPP1R36	Q96LQ0	422 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PCDHB18P	Q96TA0	734 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PCDH10	Q9P2E7	1040 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PPL	O60437	1756 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FAM155A	B1AL88	458 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	TBX3	O15119	743 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ZBTB11	O95625	1053 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MCAM	P43121	646 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	EIF2B2	P49770	351 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	C19orf57	Q0VDD7	668 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	STX3	Q13277	289 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	TSTA3	Q13630	321 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MAPRE1	Q15691	268 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ARHGAP44	Q17R89	818 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	EDRF1	Q3B7T1	1238 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	C10orf62	Q5T681	223 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DRICH1	Q6PGQ1	229 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	RNF207	Q6ZRF8	634 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	RHOT2	Q8IXI1	618 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	SLC25A41	Q8N5S1	370 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MIGA1	Q8NAN2	632 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	TRUB1	Q8WWH5	349 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FGFBP2	Q9BYJ0	223 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	NMUR2	Q9GZQ4	415 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	LIN28A	Q9H9Z2	209 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	RAB26	Q9ULW5	256 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FNDC3A	Q9Y2H6	1198 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MRPS7	Q9Y2R9	242 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	GCAT	O75600	419 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DLD	P09622	509 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	BMPR1A	P36894	532 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ERF	P50548	548 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ALDH18A1	P54886	795 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CDKL1	Q00532	357 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CDR2	Q01850	454 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	FAAP100	Q0VG06	881 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ADGRE1	Q14246	886 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	BMT2	Q1RMZ1	405 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CCDC33	Q8N5R6	958 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	TMEM102	Q8N9M5	508 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MCU	Q8NE86	351 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	UHRF1	Q96T88	793 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MKNK1	Q9BUB5	465 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	C6orf62	Q9GZU0	229 aa	Predicted RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	C12orf65	Q9H3J6	166 aa	Known RBP	3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		Q9H521	79 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	DNAJC18	Q9H819	358 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	MKS1	Q9NXB0	559 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	PCDHA2	Q9Y5H9	948 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		A0A0G2JND7	137 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029		J3QRK9	145 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	CYP26A1	O43174	497 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	HOXA2	O43364	376 aa		3.01	□□□□□ -1.93
CHD9-218	ENST00000566029	HLA-DOA	P06340	250 aa		3.01	□□□□□ -1.93

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