RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 MKRN2Q9H000 416 aaKnown RBP3.21□□□□□ -1.89
CHD9-216ENST00000565803 C2orf40Q9H1Z8 148 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 EPN3Q9H201 632 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 ADNPQ9H2P0 1102 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 MLXIPQ9HAP2 919 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 SAYSD1Q9NPB0 183 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 CNNM1Q9NRU3 951 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 GPRC5DQ9NZD1 345 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 REV1Q9UBZ9 1251 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 MAD2L2Q9UI95 211 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 CYTH4Q9UIA0 394 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 TEKT2Q9UIF3 430 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 PPM1HQ9ULR3 514 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 AP4E1Q9UPM8 1137 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 CLCA2Q9UQC9 943 aa3.21□□□□□ -1.89
CHD9-216ENST00000565803 PRAMEF27A3QJZ7 478 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 H3BML4 177 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CDK2AP1O14519 115 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ACSL4O60488 711 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 PAPLNO95428 1278 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 DLATP10515 647 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 BPIP17213 487 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 MCM5P33992 734 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CPA2P48052 419 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 MRPL12P52815 198 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 MTTPP55157 894 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 OTUD4Q01804 1114 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 SLC14A1Q13336 389 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 RAPSNQ13702 412 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 BYSLQ13895 437 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 XKR9Q5GH70 373 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 C1orf185Q5T7R7 199 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ATG16L1Q676U5 607 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TMEM214Q6NUQ4 689 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 CCDC62Q6P9F0 684 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SASS6Q6UVJ0 657 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 USP45Q70EL2 814 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 PXKQ7Z7A4 578 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 VPS36Q86VN1 386 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 P3H2Q8IVL5 708 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 AGGF1Q8N302 714 aaeCLIP3.21□□□□□ -1.9
CHD9-216ENST00000565803 DEFB123Q8N688 67 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 DENND6BQ8NEG7 585 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SLC22A8Q8TCC7 542 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TMEM40Q8WWA1 233 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 DNAAF4Q8WXU2 420 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 MTFMTQ96DP5 389 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 MYO19Q96H55 970 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CMTM3Q96MX0 182 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TSEN34Q9BSV6 310 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 FUT8Q9BYC5 575 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ANKRD2Q9GZV1 360 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ZMAT3Q9HA38 289 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 C17orf75Q9HAS0 396 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SLC35D1Q9NTN3 355 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CPNE7Q9UBL6 633 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 FAM153AQ9UHL3 310 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 NARFQ9UHQ1 456 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 DSEQ9UL01 958 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 KCNH4Q9UQ05 1017 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 C15orf41Q9Y2V0 281 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 NOSIPQ9Y314 301 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 ARHGAP6O43182 974 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SCGB2A1O75556 95 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SURF6O75683 361 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 DIRAS3O95661 229 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 IL2RAP01589 272 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ITGA2BP08514 1039 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CYC1P08574 325 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CASTP20810 708 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 CPT2P23786 658 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CETN2P41208 172 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CAMLGP49069 296 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 NR2C2P49116 596 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 AARSP49588 968 aaKnown RBP eCLIP3.21□□□□□ -1.93e-6■■■■■ 61.8
CHD9-216ENST00000565803 GBX2P52951 348 aaPredicted RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 RPS3AP61247 264 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 PSMC6P62333 389 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 GSTO1P78417 241 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ACY1Q03154 408 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 MYO1EQ12965 1108 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 UBAP2LQ14157 1087 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 POLD3Q15054 466 aaPredicted RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 ZNF174Q15697 407 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ADIPOQQ15848 244 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 PKDCCQ504Y2 493 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ANKRD39Q53RE8 183 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SGO1Q5FBB7 561 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CT83Q5H943 113 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 NHSL2Q5HYW2 709 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 DGKKQ5KSL6 1271 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 WIPI1Q5MNZ9 446 aaPredicted RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 Q5PR19 223 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TEX35Q5T0J7 233 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SLC9C2Q5TAH2 1124 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 C6orf163Q5TEZ5 329 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TMEM132EQ6IEE7 984 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 KCNT2Q6UVM3 1135 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ARMCX2Q7L311 632 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms