RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OGDHQ02218 1023 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 KCNC3Q14003 757 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PM20D1Q6GTS8 502 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PDE12Q6L8Q7 609 aaKnown RBP11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PEX26Q7Z412 305 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 SCML4Q8N228 414 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 KIF18AQ8NI77 898 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 GPR152Q8TDT2 470 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 RXFP2Q8WXD0 754 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 GOLGA1Q92805 767 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 CEP295NLQ96MC4 621 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 RIPOR3Q96MK2 946 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 PRRX2Q99811 253 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 FBXO44Q9H4M3 255 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 TLE6Q9H808 572 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 AMFRQ9UKV5 643 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 USTQ9Y2C2 406 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 JRKLQ9Y4A0 524 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 HYOU1Q9Y4L1 999 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 CEP250Q9BV73 2442 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 CACNA1BQ00975 2339 aa11.6□□□□□ -0.55
SF3B3-205ENST00000564899 C2CD4BA6NLJ0 364 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 SLC38A8A6NNN8 435 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 YJEFN3A6XGL0 299 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 E7ENQ6 273 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 DPYSL4O14531 572 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 ENC1O14682 589 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 FANCGO15287 622 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 GLUD1P00367 558 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 LTFP02788 710 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 ATP1A1P05023 1023 aaKnown RBP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 PDGFRAP16234 1089 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 DESP17661 470 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 SDC4P31431 198 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 SLC1A1P43005 524 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 ZNF143P52747 638 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 USP46P62068 366 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 ZNF252P-AS1Q0IIN9 211 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 PLD1Q13393 1074 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 PIGHQ14442 188 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 VEPH1Q14D04 833 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 DUSP6Q16828 381 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 TRNP1Q6NT89 227 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 ARCQ7LC44 396 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 BHLHA9Q7RTU4 235 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 NT5DC3Q86UY8 548 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 TCEAL8Q8IYN2 117 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 DEFB106AQ8N104 65 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 NIPA2Q8N8Q9 360 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 FBXO32Q969P5 355 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 CNPY3Q9BT09 278 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 TRIM62Q9BVG3 475 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 POPDC2Q9HBU9 364 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 COMMD8Q9NX08 183 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 FBXW11Q9UKB1 542 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-205ENST00000564899 SCML2Q9UQR0 700 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 INSL5Q9Y5Q6 135 aa11.59□□□□□ -0.55
SF3B3-205ENST00000564899 PTPRDP23468 1912 aa11.58□□□□□ -0.55
SF3B3-205ENST00000564899 C2CD4DB7Z1M9 353 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 CAPN9O14815 690 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 ASGR2P07307 311 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SPATA31D3P0C874 917 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 YWHAQP27348 245 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 NBL1P41271 181 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SSR1P43307 286 aaKnown RBP11.58□□□□□ -0.56
SF3B3-205ENST00000564899 DNA2P51530 1060 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
SF3B3-205ENST00000564899 TWF1Q12792 350 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 RPS6KA1Q15418 735 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 TAF12Q16514 161 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 CCDC14Q49A88 953 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SPATA31D4Q6ZUB0 917 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 CCDC149Q6ZUS6 474 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 CPNE8Q86YQ8 564 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 KREMEN2Q8NCW0 462 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 CFAP57Q96MR6 1250 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SLC2A13Q96QE2 648 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
SF3B3-205ENST00000564899 TLR10Q9BXR5 811 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 IL37Q9NZH6 218 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 EHD2Q9NZN4 543 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 GMIPQ9P107 970 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 MAGED2Q9UNF1 606 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-205ENST00000564899 SPTBN2O15020 2390 aa11.58□□□□□ -0.56
SF3B3-205ENST00000564899 KMT2BQ9UMN6 2715 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 A0A1W2PQH9 124 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 FAM92AA1XBS5 289 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CLASP2O75122 1294 aaKnown RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 RNF8O76064 485 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms