RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 CA12O43570 354 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PIAS2O75928 621 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 RNF8O76064 485 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PARP1P09874 1014 aaKnown RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 TMEM191BP0C7N4 346 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CTSAP10619 480 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PSG1P11464 419 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 BRAFP15056 766 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 SCP2P22307 547 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 THBS4P35443 961 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 MTHFSP49914 203 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PGDP52209 483 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 RPS16P62249 146 aaKnown RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 HTRA4P83105 476 aaPredicted RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 ID2Q02363 134 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CFHR1Q03591 330 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 KCNAB1Q14722 419 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CNN3Q15417 329 aaKnown RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 INSCQ1MX18 579 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 ZNF750Q32MQ0 723 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CHPFQ8IZ52 775 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 TRIM43Q96BQ3 446 aaPredicted RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 EDC3Q96F86 508 aaKnown RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PRR11Q96HE9 360 aaPredicted RBP3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 KAZALD1Q96I82 304 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 SCNM1Q9BWG6 230 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 BRINP2Q9C0B6 783 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CDH19Q9H159 772 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 USP29Q9HBJ7 922 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 MLXIPLQ9NP71 852 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 SNX15Q9NRS6 342 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 PI4KBQ9UBF8 816 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 RIMKLBQ9ULI2 386 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 SQORQ9Y6N5 450 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 CPS1P31327 1500 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 WDR7Q9Y4E6 1490 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 KIAA0556O60303 1618 aa3.01□□□□□ -1.93
SUB1P3-201ENST00000564581 ZMYM2Q9UBW7 1377 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 CNTNAP2Q9UHC6 1331 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 CUX1P39880 1505 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 PRAMEF2O60811 474 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 CRYABP02511 175 aaKnown RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 IL1R1P14778 569 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 PHKG2P15735 406 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 HTR6P50406 440 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 NANOS2P60321 138 aaKnown RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 FMO1Q01740 532 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 CFHR3Q02985 330 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 ARHGEF7Q14155 803 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 KPNB1Q14974 876 aaKnown RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 CLEC9AQ6UXN8 241 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 USP49Q70CQ1 688 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 MEPCEQ7L2J0 689 aaKnown RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 ANKRD13BQ86YJ7 626 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 C16orf71Q8IYS4 520 aaPredicted RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 KIAA0319LQ8IZA0 1049 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 C12orf76Q8N812 135 aaPredicted RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 ACRBPQ8NEB7 543 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 WIPF2Q8TF74 440 aaPredicted RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 RUNDC1Q96C34 613 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 POT1Q9NUX5 634 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 COL20A1Q9P218 1284 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 DDX20Q9UHI6 824 aaKnown RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 MID2Q9UJV3 735 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 ZSCAN21Q9Y5A6 473 aaPredicted RBP3□□□□□ -1.93
SUB1P3-201ENST00000564581 NEO1Q92859 1461 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 TRAPPC8Q9Y2L5 1435 aa3□□□□□ -1.93
SUB1P3-201ENST00000564581 PDE4DIPQ5VU43 2346 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 RICTORQ6R327 1708 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 C3P01024 1663 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 CDK12Q9NYV4 1490 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 hCG_2014768A0A024R1R8 64 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 E2F8A0AVK6 867 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 MBD3L4A6NDZ8 208 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 MBD3L3A6NE82 208 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 C16orf96A6NNT2 1141 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 M0R3H8 397 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 RRHO14718 337 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 TMPRSS11DO60235 418 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 RFPL1O75677 317 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 KLRC1P26715 233 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 CPA2P48052 419 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 ME1P48163 572 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 ANAPC15P60006 121 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 GPC5P78333 572 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 MTX1Q13505 466 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 STIM1Q13586 685 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 SLC29A2Q14542 456 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 CNGA2Q16280 664 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 ZNF772Q68DY9 489 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 GRHL2Q6ISB3 625 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 VSTM1Q6UX27 236 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 COLCA1Q6ZS62 124 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 SESTD1Q86VW0 696 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 HIST1H2AAQ96QV6 131 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 TM2D2Q9BX73 214 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 CHST8Q9H2A9 424 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 TMEM60Q9H2L4 133 aa2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 NKX1-2Q9UD57 310 aaPredicted RBP2.99□□□□□ -1.93
SUB1P3-201ENST00000564581 ITGB1BP2Q9UKP3 347 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms