RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 DNMT3LQ9UJW3 386 aa22.03■■□□□ 1.12
HERC2-204ENST00000563945 PCDHA5Q9Y5H7 936 aa22.03■■□□□ 1.12
HERC2-204ENST00000563945 IGHV1OR15-9A0A0B4J2B8 117 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 SPAARA0A1B0GVQ0 90 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 A0A1W2PQF6 199 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 UPK3BL1B0FP48 263 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 UPK3BL2E5RIL1 263 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 ASS1P00966 412 aaKnown RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 ZSCAN22P10073 491 aaPredicted RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 RARGP13631 454 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 SEMA3BQ13214 749 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 C10orf120Q5SQS8 335 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 PEAR1Q5VY43 1037 aaPredicted RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 KIAA1324Q6UXG2 1013 aaKnown RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 MIB1Q86YT6 1006 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 CCDC150Q8NCX0 1101 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 FOXJ1Q92949 421 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 CCDC47Q96A33 483 aaKnown RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 ACOX2Q99424 681 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 HNRNPABQ99729 332 aaKnown RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 NT5C1AQ9BXI3 368 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 FAM124BQ9H5Z6 455 aaPredicted RBP22.02■■□□□ 1.12
HERC2-204ENST00000563945 FSCN3Q9NQT6 498 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 MARK1Q9P0L2 795 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 SUSD2Q9UGT4 822 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 WASF3Q9UPY6 502 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 NEUROG3Q9Y4Z2 214 aa22.02■■□□□ 1.12
HERC2-204ENST00000563945 PCNX2A6NKB5 2137 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 A0A1W2PQD8 194 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 H0Y626 953 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 GFRA2O00451 464 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 ARHGAP33O14559 1287 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 CYP26A1O43174 497 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 HYAL3O43820 417 aaPredicted RBP22.01■■□□□ 1.11
HERC2-204ENST00000563945 TRIM16O95361 564 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 F13A1P00488 732 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 HLA-DRAP01903 254 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 RALAP11233 206 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 GNSP15586 552 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 NDUFV2P19404 249 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 PGFP49763 221 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 PSEN1P49768 467 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 HNRNPDQ14103 355 aaKnown RBP22.01■■□□□ 1.11
HERC2-204ENST00000563945 STARD3Q14849 445 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 KMT5BQ4FZB7 885 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 SPOPLQ6IQ16 392 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 PIP4P1Q86T03 277 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 MINDY1Q8N5J2 469 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 BHMTQ93088 406 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 PAGE5Q96GU1 130 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 HSPA12BQ96MM6 686 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 CYP3A43Q9HB55 503 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 HMGXB4Q9UGU5 601 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 NAGPAQ9UK23 515 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 ZNF510Q9Y2H8 683 aa22.01■■□□□ 1.11
HERC2-204ENST00000563945 FAM208BQ5VWN6 2430 aa22■■□□□ 1.11
HERC2-204ENST00000563945 PLXND1Q9Y4D7 1925 aa22■■□□□ 1.11
HERC2-204ENST00000563945 A0A1W2PQH9 124 aa22■■□□□ 1.11
HERC2-204ENST00000563945 KLRC4O43908 158 aa22■■□□□ 1.11
HERC2-204ENST00000563945 VAMP7P51809 220 aa22■■□□□ 1.11
HERC2-204ENST00000563945 E2F5Q15329 346 aa22■■□□□ 1.11
HERC2-204ENST00000563945 PLEKHG6Q3KR16 790 aa22■■□□□ 1.11
HERC2-204ENST00000563945 WDR45BQ5MNZ6 344 aa22■■□□□ 1.11
HERC2-204ENST00000563945 KLHDC10Q6PID8 442 aa22■■□□□ 1.11
HERC2-204ENST00000563945 CLEC20AQ6ZU45 233 aa22■■□□□ 1.11
HERC2-204ENST00000563945 TOGARAM2Q6ZUX3 1019 aa22■■□□□ 1.11
HERC2-204ENST00000563945 SPRYD3Q8NCJ5 442 aa22■■□□□ 1.11
HERC2-204ENST00000563945 KIAA0895Q8NCT3 520 aa22■■□□□ 1.11
HERC2-204ENST00000563945 TMEM174Q8WUU8 243 aa22■■□□□ 1.11
HERC2-204ENST00000563945 UCMAQ8WVF2 138 aa22■■□□□ 1.11
HERC2-204ENST00000563945 CDK5RAP1Q96SZ6 601 aaKnown RBP22■■□□□ 1.11
HERC2-204ENST00000563945 GABRG3Q99928 467 aa22■■□□□ 1.11
HERC2-204ENST00000563945 CAPN10Q9HC96 672 aa22■■□□□ 1.11
HERC2-204ENST00000563945 PNPLA8Q9NP80 782 aa22■■□□□ 1.11
HERC2-204ENST00000563945 CACNA2D2Q9NY47 1150 aa22■■□□□ 1.11
HERC2-204ENST00000563945 NUDT5Q9UKK9 219 aa22■■□□□ 1.11
HERC2-204ENST00000563945 RALYQ9UKM9 306 aaKnown RBP22■■□□□ 1.11
HERC2-204ENST00000563945 HCN2Q9UL51 889 aa22■■□□□ 1.11
HERC2-204ENST00000563945 PCDHB9Q9Y5E1 797 aa22■■□□□ 1.11
HERC2-204ENST00000563945 PRRT4C9JH25 899 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 GREM1O60565 184 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 KRT13P13646 458 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 ASPAP45381 313 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 GPRIN1Q7Z2K8 1008 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 ZCCHC14Q8WYQ9 949 aaKnown RBP21.99■■□□□ 1.11
HERC2-204ENST00000563945 GATA6Q92908 595 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 BACH2Q9BYV9 841 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 KCTD10Q9H3F6 313 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.99■■□□□ 1.11
HERC2-204ENST00000563945 OSER1Q9NX31 292 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 PLK2Q9NYY3 685 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 USP25Q9UHP3 1055 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 RAD54BQ9Y620 910 aa21.99■■□□□ 1.11
HERC2-204ENST00000563945 IGF2RP11717 2491 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 MDM4O15151 490 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 CD58P19256 250 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 CHKAP35790 457 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 COG7P83436 770 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 SLC41A1Q8IVJ1 513 aa21.98■■□□□ 1.11
HERC2-204ENST00000563945 HSCBQ8IWL3 235 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms