RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 NEURL2Q9BR09 285 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 NRDE2Q9H7Z3 1164 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 PNPOQ9NVS9 261 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
SCAMP2-204ENST00000563829 E7ESA3 106 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 DDX39AO00148 427 aaKnown RBP12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 C21orf59P57076 290 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 ZNF423Q2M1K9 1284 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 KRT80Q6KB66 452 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 SMIM5Q71RC9 77 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 CENPSQ8N2Z9 138 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 LZTR1Q8N653 840 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 SEMA6AQ9H2E6 1030 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 ASTN2O75129 1339 aaPredicted RBP12.77□□□□□ -0.36
SCAMP2-204ENST00000563829 CD1EP15812 388 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 SREBF1P36956 1147 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 ACADVLP49748 655 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 NUDT2P50583 147 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 PKNOX1P55347 436 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 IGBP1P78318 339 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 USP41Q3LFD5 358 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 TMEM214Q6NUQ4 689 aaKnown RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 FEZF2Q8TBJ5 459 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 EME1Q96AY2 570 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 RANBP9Q96S59 729 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 RNF11Q9Y3C5 154 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 MYH9P35579 1960 aaKnown RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 ARHGEF37A1IGU5 675 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 KLHL41O60662 606 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 GAS7O60861 476 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 RFPL1O75677 317 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 COX4I1P13073 169 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 TCN1P20061 433 aaPredicted RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 KCNT1Q5JUK3 1230 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 THOC7Q6I9Y2 204 aaKnown RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 CATSPER1Q8NEC5 780 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 ADCY4Q8NFM4 1077 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 KLC2Q9H0B6 622 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 RIMS3Q9UJD0 308 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 PCDHB2Q9Y5E7 798 aa12.77□□□□□ -0.37
SCAMP2-204ENST00000563829 CROCCQ5TZA2 2017 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 PSMD12O00232 456 aaPredicted RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 SLC16A4O15374 487 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 CST8O60676 142 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 XRCC1P18887 633 aaPredicted RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 CDH3P22223 829 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 SLC1A6P48664 564 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 IDH3AP50213 366 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 GPC3P51654 580 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 DHRS4L2Q6PKH6 230 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 SV2AQ7L0J3 742 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 BHLHE22Q8NFJ8 381 aaPredicted RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 MCEEQ96PE7 176 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 CDRT15Q96T59 188 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 LXNQ9BS40 222 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 STRA6Q9BX79 667 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 GPRC5CQ9NQ84 441 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 J3QRK9 145 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 DGKIO75912 1065 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 H6PDO95479 791 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 ATP5BP06576 529 aaKnown RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 FGFR3P22607 806 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 EPHA3P29320 983 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 HMOX2P30519 316 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 ECE1P42892 770 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 THOP1P52888 689 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 RHBDL3P58872 404 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 DCUN1D2Q6PH85 259 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 MAVSQ7Z434 540 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 HAUS6Q7Z4H7 955 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 FBXL8Q96CD0 374 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 SNX27Q96L92 541 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 IP6K2Q9UHH9 426 aa12.76□□□□□ -0.37
SCAMP2-204ENST00000563829 CDC14AQ9UNH5 594 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms