RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 HPS1Q92902 700 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 SLCO2A1Q92959 643 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 FAM149B1Q96BN6 582 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 SLITRK1Q96PX8 696 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PNKPQ96T60 521 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 RTP3Q9BQQ7 232 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 DDX23Q9BUQ8 820 aaKnown RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 FAM129AQ9BZQ8 928 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 ZCWPW1Q9H0M4 648 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 DDX47Q9H0S4 455 aaKnown RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 LRRC19Q9H756 370 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PRDM5Q9NQX1 630 aaPredicted RBP10.13□□□□□ -0.79
UBFD1-202ENST00000563366 PRKAG2Q9UGJ0 569 aa10.13□□□□□ -0.79
UBFD1-202ENST00000563366 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
UBFD1-202ENST00000563366 LRRD1A4D1F6 860 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF487B1APH4 448 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CLDN5O00501 218 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 NDC80O14777 642 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CAPN9O14815 690 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 DGKIO75912 1065 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 ZBED1O96006 694 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 ITGB1P05556 798 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 FGFR3P22607 806 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 MIPP30301 263 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 SLC11A1P49279 550 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 EPHB4P54760 987 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 BCAR1P56945 870 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 DAOAP59103 153 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 VSNL1P62760 191 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CCNG2Q16589 344 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 SLC25A52Q3SY17 297 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 FAM171A1Q5VUB5 890 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 KIAA0319Q5VV43 1072 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 EMBQ6PCB8 327 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CCDC137Q6PK04 289 aaKnown RBP10.12□□□□□ -0.79
UBFD1-202ENST00000563366 SPOCD1Q6ZMY3 1216 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 BEND5Q7L4P6 421 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
UBFD1-202ENST00000563366 OR10T2Q8NGX3 314 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 SPPL2BQ8TCT7 592 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 FAM172AQ8WUF8 416 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 TOP1MTQ969P6 601 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 MAGOHBQ96A72 148 aaKnown RBP10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CEP295NLQ96MC4 621 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 SMOQ99835 787 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 FAM114A2Q9NRY5 505 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
UBFD1-202ENST00000563366 PCDHB5Q9Y5E4 795 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 PLXNA3P51805 1871 aa10.12□□□□□ -0.79
UBFD1-202ENST00000563366 hCG_1818297A0A087WSY0 165 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 PIK3R2O00459 728 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 RAD51CO43502 376 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 B4GALT3O60512 393 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 ECEL1O95672 775 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 F9P00740 461 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 LTFP02788 710 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 GALTP07902 379 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 RALAP11233 206 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 LAG3P18627 525 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 BDNFP23560 247 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 PPM1AP35813 382 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 PTGIRP43119 386 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 MAGEA11P43364 429 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 RELBQ01201 579 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 KLF1Q13351 362 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 TFDP2Q14188 446 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 MRPL58Q14197 206 aaKnown RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 OCLNQ16625 522 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CDO1Q16878 200 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 USP41Q3LFD5 358 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CTXN3Q4LDR2 81 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CPNE8Q86YQ8 564 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CCDC105Q8IYK2 499 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 TNS4Q8IZW8 715 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 KCTD6Q8NC69 237 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CCHCR1Q8TD31 782 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CENPIQ92674 756 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 PIWIL1Q96J94 861 aaKnown RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 CFAP57Q96MR6 1250 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 SLC2A13Q96QE2 648 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 SLC9A7Q96T83 725 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 C11orf84Q9BUA3 381 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-202ENST00000563366 ULBP1Q9BZM6 244 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 ZWILCHQ9H900 591 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
UBFD1-202ENST00000563366 MARCH5Q9NX47 278 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms