RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TRIM59Q8IWR1 403 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 KIF18AQ8NI77 898 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SMARCE1Q969G3 411 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 AIDAQ96BJ3 306 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 C19orf60Q96EN9 201 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 FGD4Q96M96 766 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 APOL6Q9BWW8 343 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 COQ10BQ9H8M1 238 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SPACA1Q9HBV2 294 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 DDX43Q9NXZ2 648 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 TUBA8Q9NY65 449 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 PI4KBQ9UBF8 816 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 DDX19BQ9UMR2 479 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 VPS9D1Q9Y2B5 631 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 NR2E3Q9Y5X4 410 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 KCNMB2Q9Y691 235 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 GMEB1Q9Y692 573 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 COMMD3-BMI1R4GMX3 469 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ATP10BO94823 1461 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CCDC7Q96M83 1385 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 JCADQ9P266 1359 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CYP3A7-CYP3A51PA0A087WV96 503 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 GOLGA8MH3BSY2 632 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 DNM1LO00429 736 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ACTN4O43707 911 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 CYTIPO60759 359 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CYP2E1P05181 493 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 ENO2P09104 434 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 UBL4AP11441 157 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 AGXTP21549 392 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 TGM1P22735 817 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CYP3A7P24462 503 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PTGIRP43119 386 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PIP4K2AP48426 406 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 PSEN2P49810 448 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ZNF81P51508 661 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 EPHB4P54760 987 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CDK17Q00537 523 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 TMEM62Q0P6H9 643 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 MAMLD1Q13495 774 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 PRSS53Q2L4Q9 553 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ZNF628Q5EBL2 1059 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 GARNL3Q5VVW2 1013 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 KIF18BQ86Y91 864 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SP8Q8IXZ3 490 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 FAM133AQ8N9E0 248 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ZNF483Q8TF39 744 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 PDLIM2Q96JY6 352 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 TWNKQ96RR1 684 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 CEP44Q9C0F1 390 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ABCG8Q9H221 673 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 MRPL44Q9H9J2 332 aaKnown RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 BCL2L12Q9HB09 334 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SEC31BQ9NQW1 1179 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 SMPD3Q9NY59 655 aaPredicted RBP4.99□□□□□ -1.61
SMG1-207ENST00000563235 BAIAP2L1Q9UHR4 511 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 APPL1Q9UKG1 709 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 ATP6V1DQ9Y5K8 247 aa4.99□□□□□ -1.61
SMG1-207ENST00000563235 IQGAP1P46940 1657 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 SPATA31A6Q5VVP1 1343 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 E9PBE3 544 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PDE2AO00408 941 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 PSMA7O14818 248 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CACNG3O60359 315 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 SEC24DO94855 1032 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 NDST3O95803 873 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 IL1AP01583 271 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 YY1P25490 414 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 AXLP30530 894 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CSTF2P33240 577 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMG1-207ENST00000563235 BMPR1AP36894 532 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 PRKCIP41743 596 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 GRIA4P48058 902 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 POU3F4P49335 361 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 RAB1AP62820 205 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 TYRO3Q06418 890 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ADAM9Q13443 819 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 DCTN2Q13561 401 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 PET117Q6UWS5 81 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CDH24Q86UP0 819 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 LRRC34Q8IZ02 419 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MAML2Q8IZL2 1156 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 ADGRG2Q8IZP9 1017 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 BBS5Q8N3I7 341 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ATG4CQ96DT6 458 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 CCDC77Q9BR77 488 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 KIFC3Q9BVG8 833 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 FRMD8P1Q9BZ68 369 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 KCNH6Q9H252 994 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 SH2D4AQ9H788 454 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 EVA1AQ9H8M9 152 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ZNF214Q9UL59 606 aaPredicted RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 SMG5Q9UPR3 1016 aaKnown RBP4.98□□□□□ -1.61
SMG1-207ENST00000563235 SLC8A2Q9UPR5 921 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ERVK-19Q9WJR5 959 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 AKT3Q9Y243 479 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 MAN2B2Q9Y2E5 1009 aa4.98□□□□□ -1.61
SMG1-207ENST00000563235 ZKSCAN5Q9Y2L8 839 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms