RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PBX1P40424 430 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 USP8P40818 1118 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 MLLT6P55198 1093 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-204ENST00000563130 BPIFB4P59827 614 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 POLR2FP61218 127 aaKnown RBP6.5□□□□□ -1.37
CNOT1-204ENST00000563130 SH3BP2P78314 561 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 PFKPQ01813 784 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 ADIGQ0VDE8 80 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 ARHGAP29Q52LW3 1261 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 DENND1BQ6P3S1 775 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 TMEM110Q86TL2 294 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 EPS8L1Q8TE68 723 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 ULBP1Q9BZM6 244 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 CCSER2Q9H7U1 834 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 LRRC4Q9HBW1 653 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 COL4A2P08572 1712 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 A0A1W2PQH9 124 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 YJEFN3A6XGL0 299 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 E7ENQ6 273 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 GREM1O60565 184 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 TBX18O95935 607 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 ABL1P00519 1130 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 GDI1P31150 447 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 CDH5P33151 784 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-204ENST00000563130 SOX5P35711 763 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 DAOAP59103 153 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 FANCCQ00597 558 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 FILIP1LQ4L180 1135 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 NEK11Q8NG66 645 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 SH3RF2Q8TEC5 729 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 DDX23Q9BUQ8 820 aaKnown RBP6.5□□□□□ -1.37
CNOT1-204ENST00000563130 TTYH3Q9C0H2 523 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 TSPY26PQ9H489 355 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 BRD9Q9H8M2 597 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 NLRC4Q9NPP4 1024 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 ARHGEF3Q9NR81 526 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 NOCTQ9UK39 431 aaKnown RBP6.5□□□□□ -1.37
CNOT1-204ENST00000563130 CPQQ9Y646 472 aa6.5□□□□□ -1.37
CNOT1-204ENST00000563130 GOLGA6L19H0YKK7 550 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 LEFTY2O00292 366 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 ZNF263O14978 683 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 SERPINC1P01008 464 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 PDGFBP01127 241 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 MBL2P11226 248 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 RARGP13631 454 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 ATP5C1P36542 298 aaKnown RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 RGS7P49802 495 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 STARD6P59095 220 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 YWHAGP61981 247 aaKnown RBP eCLIP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 TPM4P67936 248 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 PDCLQ13371 301 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 MTF1Q14872 753 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 NR6A1Q15406 480 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 SLC44A4Q53GD3 710 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 TMEM31Q5JXX7 168 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 NOP9Q86U38 636 aaKnown RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 ARHGAP18Q8N392 663 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 OSCP1Q8WVF1 389 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 IRGQQ8WZA9 623 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 NDRG1Q92597 394 aaKnown RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 ZFYVE19Q96K21 471 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 SPAG5Q96R06 1193 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 LRFN3Q9BTN0 628 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 KLF16Q9BXK1 252 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-204ENST00000563130 HPS4Q9NQG7 708 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 FKBPLQ9UIM3 349 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 MYO6Q9UM54 1294 aa6.49□□□□□ -1.37
CNOT1-204ENST00000563130 FAM86C2PA6NEL3 165 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 OTOL1A6NHN0 477 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 E5RJQ4 531 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 PAPSS1O43252 624 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 GFPT2O94808 682 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 FBXO21O94952 628 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 FYNP06241 537 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 LCP1P13796 627 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 GLULP15104 373 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 KRT9P35527 623 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 STAT1P42224 750 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 ACADSBP45954 432 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 PRKCQQ04759 706 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 MLF2Q15773 248 aaPredicted RBP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 BSPRYQ5W0U4 402 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 BEND5Q7L4P6 421 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 DDX42Q86XP3 938 aaKnown RBP eCLIP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 ZNF677Q86XU0 584 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 YAF2Q8IY57 180 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 SIX5Q8N196 739 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 SIX6OS1Q8N1H7 587 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 CLEC4CQ8WTT0 213 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 CPXM1Q96SM3 734 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 CDK5RAP1Q96SZ6 601 aaKnown RBP6.48□□□□□ -1.37
CNOT1-204ENST00000563130 EDEM3Q9BZQ6 932 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 HEBP1Q9NRV9 189 aa6.48□□□□□ -1.37
CNOT1-204ENST00000563130 GKN1Q9NS71 199 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms