RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 E2F7Q96AV8 911 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 PDLIM2Q96JY6 352 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 SLC2A13Q96QE2 648 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 SLC22A12Q96S37 553 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 CYP2S1Q96SQ9 504 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 ZFP14Q9HCL3 533 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 TDP1Q9NUW8 608 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.67■□□□□ 0.74
RAB40C-207ENST00000563109 MARCH2Q9P0N8 246 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 STAP1Q9ULZ2 295 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 ARHGAP26Q9UNA1 814 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 NAALADL1Q9UQQ1 740 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 CPQQ9Y646 472 aa19.67■□□□□ 0.74
RAB40C-207ENST00000563109 EIF3CLB5ME19 914 aaKnown RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 ATMINO43313 823 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 NDUFA10O95299 355 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 PRAMEF12O95522 483 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 TBX18O95935 607 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 DESP17661 470 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 NOS2P35228 1153 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 GPC5P78333 572 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 DCUN1D2Q6PH85 259 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 MIB1Q86YT6 1006 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 TMEM139Q8IV31 216 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 CELF5Q8N6W0 485 aaKnown RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 EIF3CQ99613 913 aaKnown RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 RNF38Q9H0F5 515 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 SMG9Q9H0W8 520 aaKnown RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 SMOC2Q9H3U7 446 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 TRPV4Q9HBA0 871 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 MRPL47Q9HD33 250 aaKnown RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 SMPD4Q9NXE4 827 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 RRN3Q9NYV6 651 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 MYO1AQ9UBC5 1043 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 EPN1Q9Y6I3 576 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-207ENST00000563109 EYSQ5T1H1 3165 aa19.66■□□□□ 0.74
RAB40C-207ENST00000563109 SIGLEC16A6NMB1 481 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 MDM4O15151 490 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 FYNP06241 537 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 MATKP42679 507 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 GALCP54803 685 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 ZP2Q05996 745 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 ARCQ7LC44 396 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 LRRC8AQ8IWT6 810 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 TTC16Q8NEE8 873 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 DQX1Q8TE96 717 aaKnown RBP19.65■□□□□ 0.74
RAB40C-207ENST00000563109 USP13Q92995 863 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-207ENST00000563109 SERPINB11Q96P15 392 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 MCEEQ96PE7 176 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 THAP2Q9H0W7 228 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 FAM204AQ9H8W3 233 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 OBP2AQ9NY56 170 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 TMEM59LQ9UK28 342 aa19.65■□□□□ 0.74
RAB40C-207ENST00000563109 SLC12A8A0AV02 714 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 LOC730098B7Z3J9 87 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 LCA5LO95447 670 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 TMEM253P0C7T8 217 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 BMP1P13497 986 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 GBP1P32455 592 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 MAGEA1P43355 309 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 SULT1E1P49888 294 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 KPNA1P52294 538 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-207ENST00000563109 COG7P83436 770 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 MAMLD1Q13495 774 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 SYPL2Q5VXT5 272 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 PLEKHA7Q6IQ23 1121 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 POTEHQ6S545 545 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 RAD9BQ6WBX8 426 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 SH3RF2Q8TEC5 729 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 KHSRPQ92945 711 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAB40C-207ENST00000563109 NXPE3Q969Y0 559 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 ELSPBP1Q96BH3 223 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 SFMBT1Q9UHJ3 866 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 INTUQ9ULD6 942 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 SH3BP1Q9Y3L3 701 aa19.64■□□□□ 0.73
RAB40C-207ENST00000563109 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.73
RAB40C-207ENST00000563109 TCRBV5S1A1TA0A578 114 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 LEFTY2O00292 366 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 ARHGAP6O43182 974 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 ECI2O75521 394 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 GJB6O95452 261 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 IRF1P10914 325 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 TCF3P15923 654 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 GPD1P21695 349 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 FCARP24071 287 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 SDC4P31431 198 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 FLT3P36888 993 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 VIPR2P41587 438 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 USP4Q13107 963 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 NNTQ13423 1086 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 HTR4Q13639 388 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 MTF1Q14872 753 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 TJAP1Q5JTD0 557 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 PARM1Q6UWI2 310 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 TAC4Q86UU9 113 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 YAF2Q8IY57 180 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 TXLNBQ8N3L3 684 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 EMC1Q8N766 993 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms