RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ITM2AO43736 263 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 PEX1O43933 1283 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 C6orf222P0C671 652 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 SFNP31947 248 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 ACTR2P61160 394 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 IRX4P78413 519 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 APOFQ13790 326 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 HSF5Q4G112 596 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 RALGPS1Q5JS13 557 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 SYCP2LQ5T4T6 812 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 C6orf183Q5T699 404 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 GADL1Q6ZQY3 521 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 AMIGO2Q86SJ2 522 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 ARHGEF19Q8IW93 802 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 BANPQ8N9N5 519 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 XXYLT1Q8NBI6 393 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 C12orf42Q96LP6 360 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 TMEM206Q9H813 350 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 HOXC10Q9NYD6 342 aa14.54□□□□□ -0.08
GTF3C1-203ENST00000562609 MTA2O94776 668 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 LYPLA2O95372 231 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 STAMBPO95630 424 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 CRTAMO95727 393 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 CPOXP36551 454 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 ALDH1A3P47895 512 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 GTF2BQ00403 316 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 C1orf220Q5T0J3 134 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 TMEM161BQ8NDZ6 487 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 RAB3IL1Q8TBN0 382 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 FAM111AQ96PZ2 611 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 KMT5AQ9NQR1 393 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 UTP6Q9NYH9 597 aaKnown RBP14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 SLC9A2Q9UBY0 812 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 MAD1L1Q9Y6D9 718 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 OCM2P0CE71 109 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 OCMP0CE72 109 aaPredicted RBP14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 FDX1P10109 184 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 PRKCEQ02156 737 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 NFIL3Q16649 462 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 ZNF423Q2M1K9 1284 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 PYROXD1Q8WU10 500 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 GPRASP2Q96D09 838 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 NEURL2Q9BR09 285 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 C1orf21Q9H246 121 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 KCNK4Q9NYG8 393 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 TBX20Q9UMR3 447 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 AP4B1Q9Y6B7 739 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 UBE4BO95155 1302 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 MYPNQ86TC9 1320 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 WDR81Q562E7 1941 aa14.53□□□□□ -0.08
GTF3C1-203ENST00000562609 CASQ2O14958 399 aaPredicted RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 LPXNO60711 386 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 THRAP10827 490 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 PHKA2P46019 1235 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 BCAP31P51572 246 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 DMP1Q13316 513 aaPredicted RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 UBAP2LQ14157 1087 aaKnown RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 TMEM214Q6NUQ4 689 aaKnown RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 ANKMY2Q8IV38 441 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 LMO3Q8TAP4 145 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 TMIGD2Q96BF3 282 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 FOXP3Q9BZS1 431 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 FHDC1Q9C0D6 1143 aaPredicted RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 RNF181Q9P0P0 153 aa14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 GPC6Q9Y625 555 aaPredicted RBP14.52□□□□□ -0.08
GTF3C1-203ENST00000562609 BANF1O75531 89 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 CLCN2P51788 898 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 OGFRL1Q5TC84 451 aaPredicted RBP14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 DHRS4L2Q6PKH6 230 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 LPCAT2Q7L5N7 544 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 ARID3BQ8IVW6 561 aaPredicted RBP14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 SLC7A5P1Q8MH63 180 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 TMEM143Q96AN5 459 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 BIRC8Q96P09 236 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 CCDC106Q9BWC9 280 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 XPNPEP1Q9NQW7 623 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 TBC1D23Q9NUY8 699 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 TRNAU1APQ9NX07 287 aaKnown RBP14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 POLIQ9UNA4 740 aa14.52□□□□□ -0.09
GTF3C1-203ENST00000562609 A0A1B0GTW7 788 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 STBD1O95210 358 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 FAM58BPP0C7Q3 252 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 KITP10721 976 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 EIF2B2P49770 351 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 CDK9P50750 372 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 PDE1CQ14123 709 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 SNRNP35Q16560 246 aaKnown RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 LMBRD2Q68DH5 695 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 SLC9A9Q8IVB4 645 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 ALLCQ8N6M5 410 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 JADE3Q92613 823 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 RILPQ96NA2 401 aa14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 MARCOQ9UEW3 520 aaPredicted RBP14.51□□□□□ -0.09
GTF3C1-203ENST00000562609 FOXD2O60548 495 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms