RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 VPS45Q9NRW7 570 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 GJB4Q9NTQ9 266 aa2.79□□□□□ -1.96
CHD9-204ENST00000561869 TUBA8Q9NY65 449 aaPredicted RBP2.79□□□□□ -1.96
CHD9-204ENST00000561869 ZNF521Q96K83 1311 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 POM121BA6NF01 834 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 C16orf96A6NNT2 1141 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 DSCR3O14972 297 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 FYB1O15117 783 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 KPNA5O15131 536 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SNX2O60749 519 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 WDR47O94967 919 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 FGFR2P21802 821 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 ATICP31939 592 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 PTGER1P34995 402 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 ZNF268Q14587 947 aaPredicted RBP2.78□□□□□ -1.96
CHD9-204ENST00000561869 KCNB1Q14721 858 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 MFSD13AQ14CX5 517 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 TMTC4Q5T4D3 741 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 DENND2CQ68D51 928 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 ABLIM2Q6H8Q1 611 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 KIAA0408Q6ZU52 694 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 PIP4P1Q86T03 277 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 KRT73Q86Y46 540 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 CNGA4Q8IV77 575 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 C16orf52Q8NHV5 167 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 OSR1Q8TAX0 266 aaPredicted RBP2.78□□□□□ -1.96
CHD9-204ENST00000561869 IQCDQ96DY2 449 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 C8orf48Q96LL4 319 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 FCRL4Q96PJ5 515 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SIGLEC11Q96RL6 698 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 WDR24Q96S15 920 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 FAM118BQ9BPY3 351 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SARGQ9BW04 601 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 COLEC11Q9BWP8 271 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 GATA5Q9BWX5 397 aaPredicted RBP2.78□□□□□ -1.96
CHD9-204ENST00000561869 NAA15Q9BXJ9 866 aaKnown RBP2.78□□□□□ -1.96
CHD9-204ENST00000561869 SLC25A32Q9H2D1 315 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SAP30LQ9HAJ7 183 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 ZBTB26Q9HCK0 441 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 PNPLA8Q9NP80 782 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 ELOVL5Q9NYP7 299 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 MYO1AQ9UBC5 1043 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SNX13Q9Y5W8 968 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 CACNA1IQ9P0X4 2223 aa2.78□□□□□ -1.96
CHD9-204ENST00000561869 SPATA31A1Q5TZJ5 1347 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 A0A1W2PPC4 97 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 OR2W5A6NFC9 320 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 ADAM10O14672 748 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 RRHO14718 337 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 APAF1O14727 1248 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 THAP12O43422 761 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 TMIGD3P0DMS9 266 aaPredicted RBP2.77□□□□□ -1.97
CHD9-204ENST00000561869 TMEM225BP0DP42 221 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 GALNSP34059 522 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 PBX1P40424 430 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 MMP13P45452 471 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 PRIM2P49643 509 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 YPEL5P62699 121 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 SRSF1Q07955 248 aaKnown RBP eCLIP2.77□□□□□ -1.978e-9■□□□□ 8.9
CHD9-204ENST00000561869 KCNJ12Q14500 433 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 RABEP1Q15276 862 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 C10orf25Q5T742 122 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 FAM90A2PQ658T7 463 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 CRTC1Q6UUV9 634 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 VSTM1Q6UX27 236 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 DEF8Q6ZN54 512 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 ZNF366Q8N895 744 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 PIGOQ8TEQ8 1089 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 HIC2Q96JB3 615 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 VPS50Q96JG6 964 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 HS6ST2Q96MM7 605 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 USP29Q9HBJ7 922 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 AGO4Q9HCK5 861 aaKnown RBP2.77□□□□□ -1.97
CHD9-204ENST00000561869 MLXIPLQ9NP71 852 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 HEYLQ9NQ87 328 aaPredicted RBP2.77□□□□□ -1.97
CHD9-204ENST00000561869 SLC52A1Q9NWF4 448 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 MTMR4Q9NYA4 1195 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 FAM50BQ9Y247 325 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 AFG3L2Q9Y4W6 797 aa2.77□□□□□ -1.97
CHD9-204ENST00000561869 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.76□□□□□ -1.97
CHD9-204ENST00000561869 LY6G6EA0A0G2JKS1 128 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.76□□□□□ -1.97
CHD9-204ENST00000561869 DHHO43323 396 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 TLR2O60603 784 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 CNOT3O75175 753 aaKnown RBP2.76□□□□□ -1.97
CHD9-204ENST00000561869 IGKV2-30P06310 120 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 CTSAP10619 480 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 PRF1P14222 555 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 TRIM27P14373 513 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 MST1P26927 711 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 GABRB3P28472 473 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 SLC5A2P31639 672 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 RAE1P78406 368 aaKnown RBP2.76□□□□□ -1.97
CHD9-204ENST00000561869 TXNL4AP83876 142 aaKnown RBP2.76□□□□□ -1.97
CHD9-204ENST00000561869 GHRHRQ02643 423 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 CCDC15Q0P6D6 951 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 LAMB3Q13751 1172 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 COBLL1Q53SF7 1204 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 PXDC1Q5TGL8 231 aa2.76□□□□□ -1.97
CHD9-204ENST00000561869 RAP1GAP2Q684P5 730 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms