RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TPM2P07951 284 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 MMEP08473 750 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 RALAP11233 206 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 OPRD1P41143 372 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 SLC6A11P48066 632 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 GALK1P51570 392 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 PITX1P78337 314 aaPredicted RBP14.56□□□□□ -0.08
TPM1-230ENST00000561266 PDCLQ13371 301 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 NR1I3Q14994 352 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 DHCR24Q15392 516 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 MEA1Q16626 185 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 PTPN20Q4JDL3 420 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 Q6ZNB5 142 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 Q6ZS52 159 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 HTR3DQ70Z44 454 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 RALGPS2Q86X27 583 aaPredicted RBP14.56□□□□□ -0.08
TPM1-230ENST00000561266 TMEM25Q86YD3 366 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 MAML2Q8IZL2 1156 aaPredicted RBP14.56□□□□□ -0.08
TPM1-230ENST00000561266 DTWD2Q8NBA8 298 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 ANKRD20A12PQ8NF67 263 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 OLIG1Q8TAK6 271 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 EPS8L1Q8TE68 723 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 STK32AQ8WU08 396 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 NACA2Q9H009 215 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 LHX5Q9H2C1 402 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 LMAN1LQ9HAT1 526 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 CACNA1HO95180 2353 aa14.56□□□□□ -0.08
TPM1-230ENST00000561266 SLC12A8A0AV02 714 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 MAN2B1O00754 1011 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
TPM1-230ENST00000561266 LTFP02788 710 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 RFX1P22670 979 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 SOX5P35711 763 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 FANCCQ00597 558 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 C2CD6Q53TS8 623 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 LY6G5CQ5SRR4 150 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 SYPL2Q5VXT5 272 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 PKN3Q6P5Z2 889 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 DDX42Q86XP3 938 aaKnown RBP eCLIP14.55□□□□□ -0.08
TPM1-230ENST00000561266 NEK11Q8NG66 645 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 BAP1Q92560 729 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 ATP2A3Q93084 1043 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
TPM1-230ENST00000561266 PCDHB18PQ96TA0 734 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 POLR3BQ9NW08 1133 aaPredicted RBP14.55□□□□□ -0.08
TPM1-230ENST00000561266 MARCH2Q9P0N8 246 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 NAALADL1Q9UQQ1 740 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 SH3BP1Q9Y3L3 701 aa14.55□□□□□ -0.08
TPM1-230ENST00000561266 TRDMT1O14717 391 aaKnown RBP14.54□□□□□ -0.08
TPM1-230ENST00000561266 TRIM24O15164 1050 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 EGFP01133 1207 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 CDH5P33151 784 aaPredicted RBP14.54□□□□□ -0.08
TPM1-230ENST00000561266 KRT9P35527 623 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 FMO1Q01740 532 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 CCINQ13939 588 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 TMEM196Q5HYL7 178 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
TPM1-230ENST00000561266 MSANTD2Q6P1R3 559 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 FAM183BPQ6ZVS7 135 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 RSRC2Q7L4I2 434 aaKnown RBP14.54□□□□□ -0.08
TPM1-230ENST00000561266 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 ARHGAP18Q8N392 663 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 CPA6Q8N4T0 437 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 IRGQQ8WZA9 623 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 PPP1R13BQ96KQ4 1090 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 ADAM33Q9BZ11 813 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 ABCC13Q9NSE7 274 aa14.54□□□□□ -0.08
TPM1-230ENST00000561266 H0Y858 1186 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 GRAP2O75791 330 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 FBXO21O94952 628 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
TPM1-230ENST00000561266 CORO1AP31146 461 aaKnown RBP14.53□□□□□ -0.08
TPM1-230ENST00000561266 PBX1P40424 430 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 ACADSBP45954 432 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 BPIFB4P59827 614 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 MTAPQ13126 283 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 TRIP4Q15650 581 aaPredicted RBP14.53□□□□□ -0.08
TPM1-230ENST00000561266 SMYD5Q6GMV2 418 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 LRSAM1Q6UWE0 723 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 OLFML1Q6UWY5 402 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 ADAM32Q8TC27 787 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 CPA5Q8WXQ8 436 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 NELL2Q99435 816 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 PHOX2BQ99453 314 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 TTYH3Q9C0H2 523 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 AGO1Q9UL18 857 aaKnown RBP14.53□□□□□ -0.08
TPM1-230ENST00000561266 FANCMQ8IYD8 2048 aa14.53□□□□□ -0.08
TPM1-230ENST00000561266 NFATC1O95644 943 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 STAT1P42224 750 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 RPS9P46781 194 aaKnown RBP14.52□□□□□ -0.09
TPM1-230ENST00000561266 NOMO3P69849 1222 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 ARID5AQ03989 594 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 TPGS1Q6ZTW0 290 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 IRF2BP2Q7Z5L9 587 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 TAC4Q86UU9 113 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 DENND1CQ8IV53 801 aa14.52□□□□□ -0.09
TPM1-230ENST00000561266 PHTF2Q8N3S3 785 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms