RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CDH2P19022 906 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 TCEA1P23193 301 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 CPT2P23786 658 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TBXAS1P24557 533 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 EPHA8P29322 1005 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 TLX1P31314 330 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 SLC5A2P31639 672 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KRT2P35908 639 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TCF7P36402 384 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 GLRBP48167 497 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 MEOX1P50221 254 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 BMXP51813 675 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZNF132P52740 706 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CAPZA1P52907 286 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PNLIPRP1P54315 467 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CSE1LP55060 971 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 HDAC4P56524 1084 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 WNT3P56703 355 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 WNT3AP56704 352 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 IL1RL1Q01638 556 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TEKQ02763 1124 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CHRNEQ04844 493 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KCNMA1Q12791 1236 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 RPA4Q13156 261 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ATP1A4Q13733 1029 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 BOP1Q14137 746 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 NFE2L1Q14494 772 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KCNAB1Q14722 419 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GRM4Q14833 912 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 IQCB1Q15051 598 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 C15orf59Q2T9L4 293 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 DPCR1Q3MIW9 517 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GALNTL6Q49A17 601 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZNF805Q5CZA5 627 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KRBOX4Q5JUW0 171 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZNF484Q5JVG2 852 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CBWD5Q5RIA9 395 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ERMARDQ5T6L9 678 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TTC22Q5TAA0 569 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FAM171A1Q5VUB5 890 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FAM160B1Q5W0V3 765 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CD276Q5ZPR3 534 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KRT39Q6A163 491 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ANKRD40Q6AI12 368 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CAVIN1Q6NZI2 390 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 TATDN1Q6P1N9 297 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DENND1BQ6P3S1 775 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 INO80CQ6PI98 192 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 NCEH1Q6PIU2 408 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DCLRE1AQ6PJP8 1040 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 LRSAM1Q6UWE0 723 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 UNC5DQ6UXZ4 953 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 MSANTD1Q6ZTZ1 278 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KIAA0408Q6ZU52 694 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CHST9Q7L1S5 443 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TAS1R1Q7RTX1 841 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PIWIL3Q7Z3Z3 882 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 GPR149Q86SP6 731 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 UNC5BQ8IZJ1 945 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SYNE4Q8N205 404 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TMEM130Q8N3G9 435 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FBXL6Q8N531 539 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ANKS4BQ8N8V4 417 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NAT8LQ8N9F0 302 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 IQUBQ8NA54 791 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB8BQ8NAP8 495 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 ARRDC4Q8NCT1 418 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TMEM52Q8NDY8 209 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 LINS1Q8NG48 757 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 OR5M3Q8NGP4 307 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FBXO30Q8TB52 745 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 BCAS4Q8TDM0 211 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FNIP1Q8TF40 1166 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NSMCE1Q8WV22 266 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CFHR4Q92496 578 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GCDHQ92947 438 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 GFM2Q969S9 779 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 SYAP1Q96A49 352 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 FAM149B1Q96BN6 582 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KLHL29Q96CT2 875 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TRIM44Q96DX7 344 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZNF764Q96H86 408 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 CCDC120Q96HB5 630 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 AK8Q96MA6 479 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GCNAQ96QF7 691 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 HIST1H2AAQ96QV6 131 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NACC1Q96RE7 527 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CTAGE1Q96RT6 745 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DMRTA2Q96SC8 542 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 MDFIQ99750 246 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GDF15Q99988 308 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SPXQ9BT56 116 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CCDC106Q9BWC9 280 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FUT8Q9BYC5 575 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 IMPG2Q9BZV3 1241 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 KRT23Q9C075 422 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TTYH3Q9C0H2 523 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DPH5Q9H2P9 285 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NELFAQ9H3P2 528 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 STN1Q9H668 368 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms