RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CELF4Q9BZC1 486 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 POFUT1Q9H488 388 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 IL21Q9HBE4 155 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 MCM9Q9NXL9 1143 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CROTQ9UKG9 612 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 OGDHLQ9ULD0 1010 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 C19orf53Q9UNZ5 99 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 R3HDM2Q9Y2K5 976 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TTC26A0AVF1 554 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ARVCFO00192 962 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SH2B2O14492 632 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SNX3O60493 162 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 USP1O94782 785 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CYP1A1P04798 512 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ATP5F1P24539 256 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TRPC1P48995 793 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 STX17P56962 302 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 HPCAP84074 193 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TLE2Q04725 743 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 GALNT2Q10471 571 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 HYAL2Q12891 473 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 RCN2Q14257 317 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 PRR16Q569H4 304 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 FBXO47Q5MNV8 452 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TCERG1LQ5VWI1 586 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 DAB2IPQ5VWQ8 1189 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TMEM53Q6P2H8 277 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 IL27RAQ6UWB1 636 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC65Q8IXS2 484 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TBC1D21Q8IYX1 336 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF540Q8NDQ6 660 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ABHD8Q96I13 439 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 NR1H4Q96RI1 486 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 THAP9Q9H5L6 903 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC86Q9H6F5 360 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SP110Q9HB58 689 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 EPB41L4AQ9HCS5 686 aaPredicted RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ETNK2Q9NVF9 386 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 EHD2Q9NZN4 543 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 LARSQ9P2J5 1176 aaKnown RBP7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 TJP2Q9UDY2 1190 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 SH3BGRL2Q9UJC5 107 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 PCDHA13Q9Y5I0 950 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 MYH8P13535 1937 aa7.03□□□□□ -1.28
TSPAN3-209ENST00000560715 A0A1W2PPC4 97 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 HTR3EA5X5Y0 456 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 O00370 1275 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 BIRC5O15392 142 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 ATP9AO75110 1047 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 BEST1O76090 585 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SHBGP04278 402 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 THBDP07204 575 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CHN1P15882 459 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CXCR5P32302 372 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 COPB1P53618 953 aaKnown RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SPAG1Q07617 926 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 KPNB1Q14974 876 aaKnown RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 TBCCQ15814 346 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SNX30Q5VWJ9 437 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 THOC7Q6I9Y2 204 aaKnown RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 KLC3Q6P597 504 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CEP68Q76N32 757 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 NANOGNBQ7Z5D8 188 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 OSTM1Q86WC4 334 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC17A8Q8NDX2 589 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 UTP4Q969X6 686 aaKnown RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 NUDCD1Q96RS6 583 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 ISCUQ9H1K1 167 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 GP6Q9HCN6 339 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 FAM114A2Q9NRY5 505 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 NMRK1Q9NWW6 199 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 ZDHHC3Q9NYG2 299 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 SUCLA2Q9P2R7 463 aaPredicted RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CAPN11Q9UMQ6 739 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CAMK2AQ9UQM7 478 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 USP15Q9Y4E8 981 aaPredicted RBP7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 CAPN6Q9Y6Q1 641 aa7.02□□□□□ -1.28
TSPAN3-209ENST00000560715 LSM1O15116 133 aaKnown RBP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 WDR46O15213 610 aaKnown RBP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 IL18RAPO95256 599 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 PTPRAP18433 802 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 ECHS1P30084 290 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 HOXA10P31260 410 aaPredicted RBP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CA8P35219 290 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 RGS2P41220 211 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 IRF9Q00978 393 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 GSTA3Q16772 222 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 KLHL10Q6JEL2 608 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 ZNF765Q7L2R6 523 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 SP8Q8IXZ3 490 aa7.02□□□□□ -1.29
TSPAN3-209ENST00000560715 PRR18Q8N4B5 295 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms