RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 PAEPP09466 180 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 VDRP11473 427 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 CD19P15391 556 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 TGM1P22735 817 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 MPLP40238 635 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 SPDYCQ5MJ68 293 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 NAIF1Q69YI7 327 aaPredicted RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 GPRIN1Q7Z2K8 1008 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 KBTBD6Q86V97 674 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 PIGZQ86VD9 579 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 CCDC33Q8N5R6 958 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 ZNF513Q8N8E2 541 aaPredicted RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 TRIML1Q8N9V2 468 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 SLC4A11Q8NBS3 891 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 TXNDC5Q8NBS9 432 aaKnown RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 EZH1Q92800 747 aaPredicted RBP14.79□□□□□ -0.04
TPM1-223ENST00000560445 GOLGA1Q92805 767 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 FAM81BQ96LP2 452 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 ARRDC1-AS1Q9H2J1 176 aa14.79□□□□□ -0.04
TPM1-223ENST00000560445 SCAMP3O14828 347 aaKnown RBP14.78□□□□□ -0.04
TPM1-223ENST00000560445 MAP3K13O43283 966 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 ZBED1O96006 694 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 TYRP14679 529 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 TIE1P35590 1138 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 KIR2DL1P43626 348 aaPredicted RBP14.78□□□□□ -0.04
TPM1-223ENST00000560445 FMO5P49326 533 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 YWHAGP61981 247 aaKnown RBP eCLIP14.78□□□□□ -0.04
TPM1-223ENST00000560445 GOLGA7BQ2TAP0 167 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 CBWD6Q4V339 395 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 RAB41Q5JT25 222 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 CBWD3Q5JTY5 395 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 CBWD5Q5RIA9 395 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 TTC30AQ86WT1 665 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 TMEM25Q86YD3 366 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 MIB1Q86YT6 1006 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 IL17RCQ8NAC3 791 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 RNF139Q8WU17 664 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 UCMAQ8WVF2 138 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 PLD4Q96BZ4 506 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 TRIM62Q9BVG3 475 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 MARCH2Q9P0N8 246 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 RASAL2Q9UJF2 1139 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 MAN1B1Q9UKM7 699 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 STARD13Q9Y3M8 1113 aa14.78□□□□□ -0.04
TPM1-223ENST00000560445 GFRA2O00451 464 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 TBX18O95935 607 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 PRKCSHP14314 528 aaPredicted RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 NTSR1P30989 418 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 SLC6A11P48066 632 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 DGKGP49619 791 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 TKTL1P51854 596 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 ZNF132P52740 706 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 CREB5Q02930 508 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 PAK1Q13153 545 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 PMS2CLQ68D20 193 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 SMYD5Q6GMV2 418 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 KLHL10Q6JEL2 608 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 SLC36A4Q6YBV0 504 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 LPCAT2Q7L5N7 544 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 CYP2U1Q7Z449 544 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 RABEPKQ7Z6M1 372 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 C12orf40Q86WS4 652 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 PGBD3Q8N328 593 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 NELFBQ8WX92 580 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 ARID3AQ99856 593 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 IRX2Q9BZI1 471 aaPredicted RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 NMUR1Q9HB89 426 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 CNGB3Q9NQW8 809 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 TSPAN16Q9UKR8 245 aa14.77□□□□□ -0.05
TPM1-223ENST00000560445 HBS1LQ9Y450 684 aaKnown RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.77□□□□□ -0.05
TPM1-223ENST00000560445 TCRBV21S2A2A0A5A6 115 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 TRIM49BA6NDI0 452 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 SART1O43290 800 aaKnown RBP14.76□□□□□ -0.05
TPM1-223ENST00000560445 ZNF217O75362 1048 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 STC2O76061 302 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 LATS1O95835 1130 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 HOXB2P14652 356 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 HOXD12P35452 270 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 PMS1P54277 932 aaKnown RBP14.76□□□□□ -0.05
TPM1-223ENST00000560445 GCNT1Q02742 428 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 EFEMP1Q12805 493 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 STARD3Q14849 445 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 PLA2G2CQ5R387 149 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 PM20D1Q6GTS8 502 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 Q6ZNB5 142 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 TPGS1Q6ZTW0 290 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 SCD5Q86SK9 330 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 CHPFQ8IZ52 775 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 SCML4Q8N228 414 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 PPM1KQ8N3J5 372 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 PHTF2Q8N3S3 785 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 NAT16Q8N8M0 369 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 MDGA1Q8NFP4 955 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 KCTD13Q8WZ19 329 aa14.76□□□□□ -0.05
TPM1-223ENST00000560445 IRGQQ8WZA9 623 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms