RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HPGDP15428 266 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 SCUBE3Q8IX30 993 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 C1QTNF7Q9BXJ2 289 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 DCDC2Q9UHG0 476 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TRPC5OSA6NMA1 111 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NTRK3Q16288 839 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 PKN1Q16512 942 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NFIL3Q16649 462 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 KCNV2Q8TDN2 545 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 SLC5A5Q92911 643 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 MANSC1Q9H8J5 431 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 NCKAP1Q9Y2A7 1128 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TRIM66O15016 1216 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 FGFR1P11362 822 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CENPAP49450 140 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 CDH8P55286 799 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 YWHAZP63104 245 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 LRRC23Q53EV4 343 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TUBGCP3Q96CW5 907 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 EPN3Q9H201 632 aa13.87□□□□□ -0.19
TRAF3-208ENST00000560371 MRPL17Q9NRX2 175 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 EIF3LQ9Y262 564 aaKnown RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 RP1L1Q8IWN7 2480 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-208ENST00000560371 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SEC24DO94855 1032 aaPredicted RBP13.86□□□□□ -0.19
TRAF3-208ENST00000560371 LGALS2P05162 132 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 BDNFP23560 247 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 CYP2F1P24903 491 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TERF2Q15554 542 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 POTEAQ6S8J7 498 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 THUMPD3Q9BV44 507 aaKnown RBP13.86□□□□□ -0.19
TRAF3-208ENST00000560371 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 GOLGA8TH3BQL2 631 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TCN1P20061 433 aaPredicted RBP13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TATDN2Q93075 761 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 EME1Q96AY2 570 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 VIPAS39Q9H9C1 493 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 ZW10O43264 779 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TSPAN3O60637 253 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TUBP50607 506 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 POLR2LP62875 67 aaKnown RBP13.86□□□□□ -0.19
TRAF3-208ENST00000560371 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
TRAF3-208ENST00000560371 GPATCH2LQ9NWQ4 482 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SYNPO2Q9UMS6 1093 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 PGK1P00558 417 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 AGBL2Q5U5Z8 902 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 STRA8Q7Z7C7 330 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 RBBP8Q99708 897 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 VANGL2Q9ULK5 521 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 MROH7Q68CQ1 1323 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SERPINB8P50452 374 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 RAD23BP54727 409 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 KRT78Q8N1N4 520 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 TBC1D13Q9NVG8 400 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 MICAL2O94851 1124 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 MSH3P20585 1137 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 SLC39A12Q504Y0 691 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 PALB2Q86YC2 1186 aa13.86□□□□□ -0.19
TRAF3-208ENST00000560371 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MGAT4DA6NG13 374 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MAGEA9P43362 315 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 HNRNPH2P55795 449 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 POU6F1Q14863 301 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 CATSPERGQ6ZRH7 1159 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 RD3Q7Z3Z2 195 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MMGT1Q8N4V1 131 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 OR2W6PQ8NHA6 318 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 CEP70Q8NHQ1 597 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MAP10Q9P2G4 905 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 MYH7P12883 1935 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 TGM3Q08188 693 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 GALNTL6Q49A17 601 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 LAYNQ6UX15 382 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 NT5DC3Q86UY8 548 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 SLC44A2Q8IWA5 706 aaPredicted RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 SERAC1Q96JX3 654 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ZCCHC2Q9C0B9 1178 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 FKTNO75072 461 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 RGMBQ6NW40 437 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ZNF614Q8N883 585 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 SLC2A14Q8TDB8 520 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 SERPINB12Q96P63 405 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 FAM167BQ9BTA0 163 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 ATP5BP06576 529 aaKnown RBP13.85□□□□□ -0.19
TRAF3-208ENST00000560371 DMTNQ08495 405 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 SENP8Q96LD8 212 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 TBC1D3BA6NDS4 549 aa13.85□□□□□ -0.19
TRAF3-208ENST00000560371 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms