RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 PDE4CQ08493 712 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 ELF2Q15723 593 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 LPAL2Q16609 132 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 USP39Q53GS9 565 aaKnown RBP20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 NAIF1Q69YI7 327 aaPredicted RBP20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 GRAMD4Q6IC98 578 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 SDE2Q6IQ49 451 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 LCLAT1Q6UWP7 414 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 KCTD13Q8WZ19 329 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 CNGB3Q9NQW8 809 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 OSER1Q9NX31 292 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 MARCH2Q9P0N8 246 aa20.69■□□□□ 0.9
KNSTRN-210ENST00000560321 NEDD8-MDP1E9PL57 170 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 O00370 1275 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 MED7O43513 233 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 TULP3O75386 442 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 RHOBTB1O94844 696 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 SLC6A11P48066 632 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 EFEMP1Q12805 493 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 BYSLQ13895 437 aaKnown RBP20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 PUM1Q14671 1186 aaKnown RBP eCLIP20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 CNGA2Q16280 664 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 GAB4Q2WGN9 574 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 PM20D1Q6GTS8 502 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 ERMP1Q7Z2K6 904 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 SCD5Q86SK9 330 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 TTC30AQ86WT1 665 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 TMEM25Q86YD3 366 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 NAT16Q8N8M0 369 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 C2orf42Q9NWW7 574 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 MARK1Q9P0L2 795 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 NUDT5Q9UKK9 219 aa20.68■□□□□ 0.9
KNSTRN-210ENST00000560321 THADAQ6YHU6 1953 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 CACNG3O60359 315 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 STC2O76061 302 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 TYRP14679 529 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 TIE1P35590 1138 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 PXNP49023 591 aaPredicted RBP20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 HARS2P49590 506 aaKnown RBP20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 PGFP49763 221 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 MFAP3P55082 362 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 ADIGQ0VDE8 80 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 CRY1Q16526 586 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 TPGS1Q6ZTW0 290 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 ETFBKMTQ8IXQ9 262 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 SCML4Q8N228 414 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 FAM160A2Q8N612 972 aaPredicted RBP20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 RBBP8NLQ8NC74 664 aaPredicted RBP20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 PLD4Q96BZ4 506 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 TRIM62Q9BVG3 475 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 ULBP1Q9BZM6 244 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 ABCC13Q9NSE7 274 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 DNAJC17Q9NVM6 304 aaKnown RBP20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 SDK1Q7Z5N4 2213 aa20.67■□□□□ 0.9
KNSTRN-210ENST00000560321 SPTBN4Q9H254 2564 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 M0QYV0 167 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 SART1O43290 800 aaKnown RBP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 FBXO21O94952 628 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 KLF8O95600 359 aaPredicted RBP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 KRT5P13647 590 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 ZNF445P59923 1031 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 SPEM2Q0P670 501 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 C10orf76Q5T2E6 689 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 SMYD5Q6GMV2 418 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 GBP6Q6ZN66 633 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 RRAGAQ7L523 313 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 CCDC33Q8N5R6 958 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 UBR7Q8N806 425 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 TERB1Q8NA31 727 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 UBA3Q8TBC4 463 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 IRGQQ8WZA9 623 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 EZH1Q92800 747 aaPredicted RBP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 HSFY1Q96LI6 401 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 INTS2Q9H0H0 1204 aaKnown RBP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 NUP62CLQ9H1M0 184 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 CLSTN2Q9H4D0 955 aa20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 BCCIPQ9P287 314 aaKnown RBP eCLIP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 CDV3Q9UKY7 258 aaKnown RBP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.66■□□□□ 0.9
KNSTRN-210ENST00000560321 CFAP54Q96N23 3096 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 SLC12A8A0AV02 714 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 MDM4O15151 490 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 CORO1AP31146 461 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 MTIF2P46199 727 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 DGKGP49619 791 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 SRSF5Q13243 272 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 C12orf40Q86WS4 652 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 ALLCQ8N6M5 410 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 ZNF513Q8N8E2 541 aaPredicted RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 TXNDC5Q8NBS9 432 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 LMO3Q8TAP4 145 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 ZC3H10Q96K80 434 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 SPACA7Q96KW9 195 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 CNOT6LQ96LI5 555 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 GBP4Q96PP9 640 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 HBS1LQ9Y450 684 aaKnown RBP20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 PCDHGA5Q9Y5G8 931 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 GPR179Q6PRD1 2367 aa20.65■□□□□ 0.9
KNSTRN-210ENST00000560321 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.89
KNSTRN-210ENST00000560321 HMBSP08397 361 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms