RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 YJEFN3A6XGL0 299 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 E7ENQ6 273 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 TTI1O43156 1089 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ZFXP17010 805 aaPredicted RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ARL4AP40617 200 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 TUFMP49411 452 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 RABGGTBP53611 331 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 AIF1P55008 147 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 HDAC4P56524 1084 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 YWHAGP61981 247 aaKnown RBP eCLIP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 RBM10P98175 930 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 SNX1Q13596 522 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 CUL1Q13616 776 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 HLTFQ14527 1009 aaKnown RBP eCLIP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ARL13BQ3SXY8 428 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 KCNT1Q5JUK3 1230 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 RTP2Q5QGT7 225 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 TXNRD3NBQ6F5E7 133 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 PRSS55Q6UWB4 352 aaPredicted RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 CCNI2Q6ZMN8 369 aaPredicted RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ZNF365Q70YC5 407 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ATL2Q8NHH9 583 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 RNF139Q8WU17 664 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 C1orf54Q8WWF1 131 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 IFT81Q8WYA0 676 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.643e-6■■■■■ 50.8
CRTC3-209ENST00000560320 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 RNF34Q969K3 372 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 VWCEQ96DN2 955 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 CEP295NLQ96MC4 621 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 PEBP4Q96S96 227 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 NPY6RQ99463 290 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 SEPT5Q99719 369 aaPredicted RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 DHX35Q9H5Z1 703 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 PRDM16Q9HAZ2 1276 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 CHST7Q9NS84 486 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 ABCC13Q9NSE7 274 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 COX16Q9P0S2 106 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 DMGDHQ9UI17 866 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 AP4E1Q9UPM8 1137 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 INSL6Q9Y581 213 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 MRPL42Q9Y6G3 142 aaKnown RBP11.06□□□□□ -0.64
CRTC3-209ENST00000560320 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
CRTC3-209ENST00000560320 TCRBV7S2A1N4TA0A589 114 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ZNF487B1APH4 448 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 NDC80O14777 642 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 CST8O60676 142 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ZMYND10O75800 440 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ENDOD1O94919 500 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 HAPLN1P10915 354 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 KRT10P13645 584 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 YWHAQP27348 245 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ELF1P32519 619 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 OR1D2P34982 312 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 TNNT3P45378 269 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 EPHB4P54760 987 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 NME3Q13232 169 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 KLF1Q13351 362 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 SIX1Q15475 284 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 DDR2Q16832 855 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 BSPRYQ5W0U4 402 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 TPGS2Q68CL5 300 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 HFE2Q6ZVN8 426 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 BBS12Q6ZW61 710 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 GSTA5Q7RTV2 222 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 TAS1R1Q7RTX1 841 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 TMEM173Q86WV6 379 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 FAM131BQ86XD5 332 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 JAMLQ86YT9 394 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 EIF1ADQ8N9N8 165 aaKnown RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ATAD1Q8NBU5 361 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 CCHCR1Q8TD31 782 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 FBXO32Q969P5 355 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 SPATA17Q96L03 361 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 ZNF670Q9BS34 389 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 C11orf84Q9BUA3 381 aaPredicted RBP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 PLEKHA4Q9H4M7 779 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 TMEM30AQ9NV96 361 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 GPATCH2LQ9NWQ4 482 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 DDIT4Q9NX09 232 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.64
CRTC3-209ENST00000560320 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 CDY1Q9Y6F8 540 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
CRTC3-209ENST00000560320 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms