RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 DNMT3LQ9UJW3 386 aa18.34■□□□□ 0.53
CRTC3-208ENST00000560098 PILRBQ9UKJ0 227 aa18.34■□□□□ 0.53
CRTC3-208ENST00000560098 ATXN2Q99700 1313 aaKnown RBP18.34■□□□□ 0.53
CRTC3-208ENST00000560098 A0A1W2PQH9 124 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 ZBTB24O43167 697 aaPredicted RBP18.33■□□□□ 0.53
CRTC3-208ENST00000560098 TRIM49P0CI25 452 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 TRIM49CP0CI26 452 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 ENGP17813 658 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 ITPKAP23677 461 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 HOXD12P35452 270 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 MAPK8P45983 427 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 PLA2G4AP47712 749 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 RPL6Q02878 288 aaKnown RBP18.33■□□□□ 0.53
CRTC3-208ENST00000560098 PPP3CAQ08209 521 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 FOXC1Q12948 553 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 NFIL3Q16649 462 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 PEAR1Q5VY43 1037 aaPredicted RBP18.33■□□□□ 0.53
CRTC3-208ENST00000560098 SLC36A4Q6YBV0 504 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 CHPFQ8IZ52 775 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.53
CRTC3-208ENST00000560098 ACOX2Q99424 681 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.53
CRTC3-208ENST00000560098 CFAP47Q6ZTR5 3102 aa18.33■□□□□ 0.52
CRTC3-208ENST00000560098 PRRT4C9JH25 899 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 MDM4O15151 490 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 CILPO75339 1184 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 PRR29P0C7W0 189 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 KRT13P13646 458 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 CD58P19256 250 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 SYKP43405 635 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 PSEN1P49768 467 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 KIF11P52732 1056 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 ENPEPQ07075 957 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 C10orf120Q5SQS8 335 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 CD248Q9HCU0 757 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 PLXND1Q9Y4D7 1925 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 ZNF217O75362 1048 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 PROS1P07225 676 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 DGKGP49619 791 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 Q6ZNB5 142 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 TADA2BQ86TJ2 420 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 FAM186BQ8IYM0 893 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 DEFB119Q8N690 84 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 DEFB124Q8NES8 71 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 CEP76Q8TAP6 659 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
CRTC3-208ENST00000560098 GABRG3Q99928 467 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 DUSP16Q9BY84 665 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 WASF3Q9UPY6 502 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 MAPK8IP1Q9UQF2 711 aa18.32■□□□□ 0.52
CRTC3-208ENST00000560098 TNRC6BQ9UPQ9 1833 aaKnown RBP18.31■□□□□ 0.52
CRTC3-208ENST00000560098 IGHV1OR15-9A0A0B4J2B8 117 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 FAM237AA0A1B0GTK4 181 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 CFIP05156 583 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 CISD3P0C7P0 127 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 NDUFV2P19404 249 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 RPL13P26373 211 aaKnown RBP18.31■□□□□ 0.52
CRTC3-208ENST00000560098 PSMC2P35998 433 aaKnown RBP18.31■□□□□ 0.52
CRTC3-208ENST00000560098 NDUFA8P51970 172 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 KRT85P78386 507 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 ZNF33AQ06730 810 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 DPYDQ12882 1025 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 DUOXA1Q1HG43 343 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 PPP1R26Q5T8A7 1209 aaPredicted RBP18.31■□□□□ 0.52
CRTC3-208ENST00000560098 KIAA1211LQ6NV74 962 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 CCDC186Q7Z3E2 898 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 BHMTQ93088 406 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 SLC32A1Q9H598 525 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 TMEM8AQ9HCN3 771 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 CLIC5Q9NZA1 410 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 SLC6A14Q9UN76 642 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 USP3Q9Y6I4 520 aa18.31■□□□□ 0.52
CRTC3-208ENST00000560098 STC2O76061 302 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 RALAP11233 206 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 ATXN3P54252 364 aaPredicted RBP18.3■□□□□ 0.52
CRTC3-208ENST00000560098 ADAM9Q13443 819 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 RABEPKQ7Z6M1 372 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
CRTC3-208ENST00000560098 ERLEC1Q96DZ1 483 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 CDK5RAP1Q96SZ6 601 aaKnown RBP18.3■□□□□ 0.52
CRTC3-208ENST00000560098 CACNA2D2Q9NY47 1150 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 CYP8B1Q9UNU6 501 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 RAD54BQ9Y620 910 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 ASPMQ8IZT6 3477 aa18.3■□□□□ 0.52
CRTC3-208ENST00000560098 C1QTNF9BB2RNN3 333 aa18.29■□□□□ 0.52
CRTC3-208ENST00000560098 GFRA2O00451 464 aa18.29■□□□□ 0.52
CRTC3-208ENST00000560098 SERPINF2P08697 491 aa18.29■□□□□ 0.52
CRTC3-208ENST00000560098 C1QTNF9P0C862 333 aa18.29■□□□□ 0.52
CRTC3-208ENST00000560098 SPINK2P20155 84 aa18.29■□□□□ 0.52
CRTC3-208ENST00000560098 GTF2H1P32780 548 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms