RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 PRKCZQ05513 592 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 SLC1A5Q15758 541 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 DPYSL2Q16555 572 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 FAXCQ5TGI0 409 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 GDF6Q6KF10 455 aaPredicted RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 ADGRD1Q6QNK2 874 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 OSTM1Q86WC4 334 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 CCDC185Q8N715 623 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 MZB1Q8WU39 189 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 DCAKDQ8WVC6 231 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 NRDE2Q9H7Z3 1164 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 MTMR10Q9NXD2 777 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 SENP1Q9P0U3 644 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 MYO18AQ92614 2054 aaKnown RBP11.49□□□□□ -0.57
SPG11-217ENST00000559511 TSC2P49815 1807 aa11.49□□□□□ -0.57
SPG11-217ENST00000559511 KBTBD13C9JR72 458 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SEPT4O43236 478 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 ZBED1O96006 694 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 KRT4P19013 534 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CA4P22748 312 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 HNRNPH1P31943 449 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 PNPLA4P41247 253 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 LILRA4P59901 499 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 GBE1Q04446 702 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CACNB2Q08289 660 aaPredicted RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 MTFR1Q15390 333 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 KLHL38Q2WGJ6 581 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 VSIG1Q86XK7 387 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 ADGRF2Q8IZF7 708 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 WNT8BQ93098 351 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 DHX35Q9H5Z1 703 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPG11-217ENST00000559511 PAK5Q9P286 719 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 PRKAG3Q9UGI9 489 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SLC12A4Q9UP95 1085 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 CDY2AQ9Y6F7 541 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 TCRBV9S1A1TA0A576 114 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 BCLAF3A2AJT9 711 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 PTGESO14684 152 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SUN1O94901 812 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 DESP17661 470 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 NKX3-2P78367 333 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SPARCL1Q14515 664 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 SV2CQ496J9 727 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 ARCQ7LC44 396 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CCDC33Q8N5R6 958 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CCDC110Q8TBZ0 833 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 ZFP42Q96MM3 310 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
SPG11-217ENST00000559511 SLC40A1Q9NP59 571 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 HAUS2Q9NVX0 235 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CACNG4Q9UBN1 327 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 THSD7BQ9C0I4 1608 aa11.48□□□□□ -0.57
SPG11-217ENST00000559511 CFAP69A5D8W1 941 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 ZNF487B1APH4 448 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 XPOTO43592 962 aaKnown RBP11.47□□□□□ -0.57
SPG11-217ENST00000559511 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 RASSF9O75901 435 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 BEST1O76090 585 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 RARBP10826 455 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 TSHRP16473 764 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 ACAT1P24752 427 aaKnown RBP11.47□□□□□ -0.57
SPG11-217ENST00000559511 SCNN1AP37088 669 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 YWHAZP63104 245 aaKnown RBP11.47□□□□□ -0.57
SPG11-217ENST00000559511 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 DNAJC3Q13217 504 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
SPG11-217ENST00000559511 FAM47EQ6ZV65 393 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 FUKQ8N0W3 1084 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 B3GALNT2Q8NCR0 500 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 RMDN2Q96LZ7 410 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 TSPAN18Q96SJ8 248 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 SPC25Q9HBM1 224 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 ETNK2Q9NVF9 386 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 MFHAS1Q9Y4C4 1052 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 TRPV2Q9Y5S1 764 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 CLDN5O00501 218 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 KIF3CO14782 793 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 HUS1O60921 280 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 AOC2O75106 756 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 DNAJC8O75937 253 aaPredicted RBP11.47□□□□□ -0.57
SPG11-217ENST00000559511 UBOX5O94941 541 aa11.47□□□□□ -0.57
SPG11-217ENST00000559511 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms