RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 SPHK2Q9NRA0 654 aa13.21□□□□□ -0.29
LRRC28-214ENST00000559433 EP300Q09472 2414 aaPredicted RBP13.21□□□□□ -0.3
LRRC28-214ENST00000559433 GTPBP10A4D1E9 387 aaKnown RBP13.2□□□□□ -0.3
LRRC28-214ENST00000559433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-214ENST00000559433 K7EQS6 105 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 HOXC11O43248 304 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-214ENST00000559433 GREM1O60565 184 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 STC2O76061 302 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 APODP05090 189 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 LCP1P13796 627 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 SLC9A1P19634 815 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 HOXA6P31267 233 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 HOXC13P31276 330 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 RGS7P49802 495 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 LPAL2Q16609 132 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 HSP90AA4PQ58FG1 418 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 GJB7Q6PEY0 223 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 ENOSF1Q7L5Y1 443 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 BHLHA9Q7RTU4 235 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 TMEM25Q86YD3 366 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 CAMKK1Q8N5S9 505 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 GPT2Q8TD30 523 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 POLR3BQ9NW08 1133 aaPredicted RBP13.2□□□□□ -0.3
LRRC28-214ENST00000559433 MARCH2Q9P0N8 246 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 CNTN6Q9UQ52 1028 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 OTOGLQ3ZCN5 2332 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 GVINP1Q7Z2Y8 2422 aa13.2□□□□□ -0.3
LRRC28-214ENST00000559433 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 PIK3R2O00459 728 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 KAT7O95251 611 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-214ENST00000559433 COG7P83436 770 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 APBA1Q02410 837 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 DMC1Q14565 340 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 LAIR1Q6GTX8 287 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 PMF1Q6P1K2 205 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 Q6ZNB5 142 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 TPGS1Q6ZTW0 290 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.19□□□□□ -0.3
LRRC28-214ENST00000559433 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 RNF139Q8WU17 664 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 SLC35F5Q8WV83 523 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 CNGB3Q9NQW8 809 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 OLA1Q9NTK5 396 aaKnown RBP13.19□□□□□ -0.3
LRRC28-214ENST00000559433 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 ZNF292O60281 2723 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
LRRC28-214ENST00000559433 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 TBC1D3BA6NDS4 549 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 E7ENQ6 273 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 THAP12O43422 761 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 MED7O43513 233 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 HRO43593 1189 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 TULP3O75386 442 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 PON1P27169 355 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 GNA15P30679 374 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
LRRC28-214ENST00000559433 USP8P40818 1118 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 GRIA2P42262 883 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 ID4P47928 161 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 PXNP49023 591 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-214ENST00000559433 DAOAP59103 153 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
LRRC28-214ENST00000559433 CT47A1Q5JQC4 288 aaPredicted RBP13.18□□□□□ -0.3
LRRC28-214ENST00000559433 BSPRYQ5W0U4 402 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 SYT13Q7L8C5 426 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 SFTPA1Q8IWL2 248 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 ETFBKMTQ8IXQ9 262 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 SCML4Q8N228 414 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 EDEM1Q92611 657 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 BHMTQ93088 406 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
LRRC28-214ENST00000559433 TUBGCP2Q9BSJ2 902 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 DCLK3Q9C098 648 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 WDR35Q9P2L0 1181 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 DEC1Q9P2X7 70 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
LRRC28-214ENST00000559433 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
LRRC28-214ENST00000559433 AXIN1O15169 862 aa13.17□□□□□ -0.3
LRRC28-214ENST00000559433 ZBTB24O43167 697 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms