RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 GFPT1Q06210 699 aaPredicted RBP16.11■□□□□ 0.17
RPL28-206ENST00000558752 CETN1Q12798 172 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 HNRNPDQ14103 355 aaKnown RBP16.11■□□□□ 0.17
RPL28-206ENST00000558752 DUOXA1Q1HG43 343 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 TCERG1LQ5VWI1 586 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 ACOT1Q86TX2 421 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 TMEFF1Q8IYR6 380 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 RLN3Q8WXF3 142 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 SMARCD1Q96GM5 515 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 DUSP9Q99956 384 aaKnown RBP16.11■□□□□ 0.17
RPL28-206ENST00000558752 MED10Q9BTT4 135 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 ZMIZ1Q9ULJ6 1067 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 SLC6A14Q9UN76 642 aa16.11■□□□□ 0.17
RPL28-206ENST00000558752 PTPRDP23468 1912 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 H0Y626 953 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 P4HA2O15460 535 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 ZNF217O75362 1048 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 TRIM16O95361 564 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 BMP6P22004 513 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 KIR2DL1P43626 348 aaPredicted RBP16.1■□□□□ 0.17
RPL28-206ENST00000558752 MAPK8P45983 427 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 KDSRQ06136 332 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 ANO4Q32M45 955 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 MAP7D1Q3KQU3 841 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 LY6G5CQ5SRR4 150 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 SNX30Q5VWJ9 437 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 SPOPLQ6IQ16 392 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 TTI2Q6NXR4 508 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 ARMCX6Q7L4S7 300 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 ZNF513Q8N8E2 541 aaPredicted RBP16.1■□□□□ 0.17
RPL28-206ENST00000558752 DEFB124Q8NES8 71 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 XPO6Q96QU8 1125 aaKnown RBP16.1■□□□□ 0.17
RPL28-206ENST00000558752 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
RPL28-206ENST00000558752 DMAP1Q9NPF5 467 aaPredicted RBP16.1■□□□□ 0.17
RPL28-206ENST00000558752 IL37Q9NZH6 218 aa16.1■□□□□ 0.17
RPL28-206ENST00000558752 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 CLDN5O00501 218 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 HOXC11O43248 304 aaPredicted RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 CILPO75339 1184 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 CFIP05156 583 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 ENGP17813 658 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 YWHAEP62258 255 aaKnown RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 RPL6Q02878 288 aaKnown RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 PAK1Q13153 545 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 KLHL10Q6JEL2 608 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 PAQR9Q6ZVX9 377 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 FUKQ8N0W3 1084 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 HNRNPABQ99729 332 aaKnown RBP16.09■□□□□ 0.17
RPL28-206ENST00000558752 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 FBXO44Q9H4M3 255 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 CSNK1G1Q9HCP0 422 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 PILRBQ9UKJ0 227 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 NEUROG3Q9Y4Z2 214 aa16.09■□□□□ 0.17
RPL28-206ENST00000558752 TRIM49BA6NDI0 452 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 COCHO43405 550 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 OPHN1O60890 802 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 TULP3O75386 442 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 AP1G2O75843 785 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 SYPP08247 313 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 HOXB2P14652 356 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 HNRNPLP14866 589 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPL28-206ENST00000558752 NTSR1P30989 418 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 PTGER3P43115 390 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 EMC10Q5UCC4 262 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 PEAR1Q5VY43 1037 aaPredicted RBP16.08■□□□□ 0.16
RPL28-206ENST00000558752 GRAMD4Q6IC98 578 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 C12orf40Q86WS4 652 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 SEMA4DQ92854 862 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 CYFIP2Q96F07 1278 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 PNPLA8Q9NP80 782 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPL28-206ENST00000558752 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 WDR35Q9P2L0 1181 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
RPL28-206ENST00000558752 LSM7Q9UK45 103 aaKnown RBP16.08■□□□□ 0.16
RPL28-206ENST00000558752 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.16
RPL28-206ENST00000558752 BIN1O00499 593 aa16.07■□□□□ 0.16
RPL28-206ENST00000558752 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
RPL28-206ENST00000558752 ADAM23O75077 832 aa16.07■□□□□ 0.16
RPL28-206ENST00000558752 SERPINF2P08697 491 aa16.07■□□□□ 0.16
RPL28-206ENST00000558752 FAM200BP0CF97 657 aa16.07■□□□□ 0.16
RPL28-206ENST00000558752 TBXAS1P24557 533 aaPredicted RBP16.07■□□□□ 0.16
RPL28-206ENST00000558752 MARSP56192 900 aaKnown RBP16.07■□□□□ 0.16
RPL28-206ENST00000558752 E2F5Q15329 346 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms