RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 SMARCD1Q96GM5 515 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 DCBLD2Q96PD2 775 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 FBXO44Q9H4M3 255 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 ITM2CQ9NQX7 267 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 TLR8Q9NR97 1041 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 USP36Q9P275 1121 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 NXF1Q9UBU9 619 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 FLNBO75369 2602 aaKnown RBP18.83■□□□□ 0.61
TSPAN3-204ENST00000558394 NPC1O15118 1278 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 E2F5Q15329 346 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 USP49Q70CQ1 688 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 BRAPQ7Z569 592 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 FAM35AQ86V20 835 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 CCDC65Q8IXS2 484 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 BAHD1Q8TBE0 780 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 SNX19Q92543 992 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 PRCCQ92733 491 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 SIPA1Q96FS4 1042 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 TNIP3Q96KP6 325 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 NUP58Q9BVL2 599 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 TOR4AQ9NXH8 423 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 EIF2B4Q9UI10 523 aaKnown RBP18.83■□□□□ 0.6
TSPAN3-204ENST00000558394 METTL12A8MUP2 240 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 ZDHHC11BP0C7U3 371 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 ATP5C1P36542 298 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 TPMTP51580 245 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 CCDC73Q6ZRK6 1079 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 MARCH9Q86YJ5 346 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 TMPRSS6Q8IU80 811 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 RDH13Q8NBN7 331 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 SYAP1Q96A49 352 aaPredicted RBP18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 CCDC127Q96BQ5 260 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSPAN3-204ENST00000558394 FAM149AA5PLN7 773 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 TNFSF14O43557 240 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 PHACTR2O75167 634 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 AP1G2O75843 785 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 STAT6P42226 847 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 AFF3P51826 1226 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 TEAD4Q15561 434 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 SNRNP35Q16560 246 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 DBX2Q6ZNG2 339 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 SLC39A7Q92504 469 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 CRELD1Q96HD1 420 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 CGRRF1Q99675 332 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 KLF16Q9BXK1 252 aaPredicted RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 MKRN2Q9H000 416 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 KRT82Q9NSB4 513 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 PLK2Q9NYY3 685 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 IL37Q9NZH6 218 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 CABIN1Q9Y6J0 2220 aa18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 HELZ2Q9BYK8 2649 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-204ENST00000558394 A0A1B0GVT2 93 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 KCNJ18B7U540 433 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 E9PAM4 449 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 TK2O00142 265 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 DKK1O94907 266 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 CISD3P0C7P0 127 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 HLA-EP13747 358 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 ATICP31939 592 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 CDH8P55286 799 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 INAVAQ3KP66 663 aa18.8■□□□□ 0.6
TSPAN3-204ENST00000558394 BPTFQ12830 3046 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 FAM92AA1XBS5 289 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 TBX18O95935 607 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 PRB1P04280 392 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 GRK6P43250 576 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 CSNK1EP49674 416 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 MYL6P60660 151 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 LRRC69Q6ZNQ3 347 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 CACUL1Q86Y37 369 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 THAP10Q9P2Z0 257 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 BTBD3Q9Y2F9 522 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 KNL1Q8NG31 2342 aa18.79■□□□□ 0.6
TSPAN3-204ENST00000558394 STAU1O95793 577 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 TRIM21P19474 475 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 IL12RB1P42701 662 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 BNC1Q01954 994 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 ARID5AQ03989 594 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 CAMK2BQ13554 666 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 PSMD6Q15008 389 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 SMAD1Q15797 465 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 FAM124AQ86V42 546 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 TRIM9Q9C026 710 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 PCED1AQ9H1Q7 454 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 KNTC1P50748 2209 aa18.78■□□□□ 0.6
TSPAN3-204ENST00000558394 TMEM131Q92545 1883 aa18.77■□□□□ 0.6
TSPAN3-204ENST00000558394 GREM1O60565 184 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms