RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
HERC1-202ENST00000558324 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 PLK2Q9NYY3 685 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
HERC1-202ENST00000558324 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 O00370 1275 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 PIK3R2O00459 728 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 ZBED1O96006 694 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 VDRP11473 427 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 WASP42768 502 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 UBE2HP62256 183 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 CETN1Q12798 172 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ELF2Q15723 593 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 CSRP2Q16527 193 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 PLK5Q496M5 336 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 GRAMD4Q6IC98 578 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 SIX6OS1Q8N1H7 587 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ZNF513Q8N8E2 541 aaPredicted RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 TERB1Q8NA31 727 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 MDGA1Q8NFP4 955 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ERLEC1Q96DZ1 483 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
HERC1-202ENST00000558324 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 DLL3Q9NYJ7 618 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 MARCH2Q9P0N8 246 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
HERC1-202ENST00000558324 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 DCHS1Q96JQ0 3298 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 ZNF292O60281 2723 aa12.51□□□□□ -0.41
HERC1-202ENST00000558324 DMXL1Q9Y485 3027 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 TCRBV21S2A2A0A5A6 115 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 SLC12A8A0AV02 714 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 PRR5-ARHGAP8B1AHC4 643 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 M0QYV0 167 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 CACNG3O60359 315 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 GDF9O60383 454 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 LRP3O75074 770 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 ADAM23O75077 832 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 EPN2O95208 641 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 GNA14O95837 355 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 KLKB1P03952 638 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 LCP1P13796 627 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 CORO1AP31146 461 aaKnown RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 TNFRSF4P43489 277 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 RGS7P49802 495 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 ARHGAP8P85298 464 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 EOGTQ5NDL2 527 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 Q6ZNB5 142 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 TOGARAM2Q6ZUX3 1019 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 RBBP8NLQ8NC74 664 aaPredicted RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 LMO3Q8TAP4 145 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 HMGB4Q8WW32 186 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 EDEM1Q92611 657 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 XPO6Q96QU8 1125 aaKnown RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 UBXN6Q9BZV1 441 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
HERC1-202ENST00000558324 CHMP5Q9NZZ3 219 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 WDR35Q9P2L0 1181 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
HERC1-202ENST00000558324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC1-202ENST00000558324 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 MED19A0JLT2 244 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 E7ENQ6 273 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 P4HA2O15460 535 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 AFPP02771 609 aaKnown RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 PAEPP09466 180 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 SETSIPP0DME0 302 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 BCKDHBP21953 392 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 MPLP40238 635 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 DGKGP49619 791 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 ATXN1P54253 815 aaKnown RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 COG7P83436 770 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 CREB5Q02930 508 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 HSF5Q4G112 596 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 PREPLQ4J6C6 727 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 AASDHQ4L235 1098 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms