RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 CDK15Q96Q40 435 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 MMS19Q96T76 1030 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 GTPBP2Q9BX10 602 aaKnown RBP11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 PCIF1Q9H4Z3 704 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 SPHK2Q9NRA0 654 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 SMPD4Q9NXE4 827 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 TBC1D7Q9P0N9 293 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 KIAA1522Q9P206 1035 aaPredicted RBP11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 HCN2Q9UL51 889 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 SH3BP1Q9Y3L3 701 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 PTPRDP23468 1912 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 WDFY3Q8IZQ1 3526 aa11.01□□□□□ -0.65
LYSMD2-203ENST00000558126 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 MYO16Q9Y6X6 1858 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 PLXND1Q9Y4D7 1925 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 ACACAQ13085 2346 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 PRPF6O94906 941 aaKnown RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 ABL1P00519 1130 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 HOXB2P14652 356 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 TXLNAP40222 546 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 ZNF132P52740 706 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 SNRPFP62306 86 aaKnown RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 FAM193AP78312 1265 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 KDSRQ06136 332 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 NNTQ13423 1086 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 TRIP6Q15654 476 aaKnown RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 SYCP2LQ5T4T6 812 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 USP49Q70CQ1 688 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 HTR3DQ70Z44 454 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 HS2ST1Q7LGA3 356 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 SLC41A1Q8IVJ1 513 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 TRIML1Q8N9V2 468 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 OR6B3Q8NGW1 331 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 DNASE2BQ8WZ79 361 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 FAM117AQ9C073 453 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 VRTNQ9H8Y1 702 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 TMEM30AQ9NV96 361 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 MARK1Q9P0L2 795 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 CALCOCO1Q9P1Z2 691 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 WDR35Q9P2L0 1181 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 DKK4Q9UBT3 224 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 FBXO2Q9UK22 296 aaPredicted RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 SMC3Q9UQE7 1217 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
LYSMD2-203ENST00000558126 PTPRJQ12913 1337 aa11□□□□□ -0.65
LYSMD2-203ENST00000558126 NPC1O15118 1278 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 CACNG3O60359 315 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 GREM1O60565 184 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 ZNF883P0CG24 379 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 IDEP14735 1019 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 GNSP15586 552 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 ATICP31939 592 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 CACNA2D1P54289 1103 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 SCAPQ12770 1279 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 AGERQ15109 404 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 WDR45BQ5MNZ6 344 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 SDE2Q6IQ49 451 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 DBX2Q6ZNG2 339 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 TMEM25Q86YD3 366 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 CBWD2Q8IUF1 395 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 CCDC65Q8IXS2 484 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 B3GALNT2Q8NCR0 500 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 FBXO32Q969P5 355 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 FAM84AQ96KN4 292 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 XPO6Q96QU8 1125 aaKnown RBP10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 MRPL45Q9BRJ2 306 aaKnown RBP10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 B3GNT5Q9BYG0 378 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 ZNF518BQ9C0D4 1074 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 LRRC27Q9C0I9 530 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 HSPBP1Q9NZL4 362 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 NME7Q9Y5B8 376 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 TCHHQ07283 1943 aa10.99□□□□□ -0.65
LYSMD2-203ENST00000558126 APC2O95996 2303 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 A8MXQ7 604 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 EIF3DO15371 548 aaKnown RBP eCLIP10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 SH3BP5O60239 455 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 CBFA2T3O75081 653 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 DKK1O94907 266 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 FTH1P19P0C7X4 201 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 TNNC1P63316 161 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 PSMD6Q15008 389 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 E2F5Q15329 346 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 WDR72Q3MJ13 1102 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 NAXDQ8IW45 347 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 BBS7Q8IWZ6 715 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 CHPFQ8IZ52 775 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 CADM4Q8NFZ8 388 aa10.98□□□□□ -0.65
LYSMD2-203ENST00000558126 ZNF507Q8TCN5 953 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms