RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 FANK1Q8TC84 345 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 ACDQ96AP0 544 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CFAP36Q96G28 342 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 PITHD1Q9GZP4 211 aaPredicted RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 IL37Q9NZH6 218 aa11.4□□□□□ -0.58
SEMA4B-204ENST00000558065 SCO1O75880 301 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 GYS1P13807 737 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 RAG1P15918 1043 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 ARNTP27540 789 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 CDH5P33151 784 aaPredicted RBP11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 CDK10Q15131 360 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 MTERF2Q49AM1 385 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 UGT3A1Q6NUS8 523 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 AFG1LQ8WV93 481 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 NOL6Q9H6R4 1146 aaKnown RBP11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 GPRC5BQ9NZH0 403 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.59
SEMA4B-204ENST00000558065 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 METP08581 1390 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 FGGP02679 453 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 CLCNKBP51801 687 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 CDC20Q12834 499 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 EFHC1Q5JVL4 640 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TCAIMQ8N3R3 496 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SIMC1Q8NDZ2 872 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SLC26A7Q8TE54 656 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 NGLY1Q96IV0 654 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SLC4A5Q9BY07 1137 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 PFDN2Q9UHV9 154 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 FAM187AA6NFU0 413 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 NCAM2O15394 837 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 KRT10P13645 584 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 ABCB4P21439 1286 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 NLRP11P59045 1033 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 VPS72Q15906 364 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 NOC4LQ9BVI4 516 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 ARMCX1Q9P291 453 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 FETUBQ9UGM5 382 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 DNMT3LQ9UJW3 386 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 DNAJC12Q9UKB3 198 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 EIF3LQ9Y262 564 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TMEM5Q9Y2B1 443 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 FRMPD4Q14CM0 1322 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 DISP2A7MBM2 1401 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SULT1B1O43704 296 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 ADAM11O75078 769 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 DNAJB5O75953 348 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 ACSL3O95573 720 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 MTMR2Q13614 643 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TAF5Q15542 800 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 WDR44Q5JSH3 913 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TMPRSS9Q7Z410 1059 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SPATA2LQ8IUW3 424 aaPredicted RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 CHERPQ8IWX8 916 aaKnown RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TP53I13Q8NBR0 393 aaPredicted RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 GRK7Q8WTQ7 553 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 JPH3Q8WXH2 748 aaPredicted RBP11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 TMEM87BQ96K49 555 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 HPS4Q9NQG7 708 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 SLC35C2Q9NQQ7 365 aa11.39□□□□□ -0.59
SEMA4B-204ENST00000558065 DYRK3O43781 588 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ERBB2P04626 1255 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 DCKP27707 260 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 L1CAMP32004 1257 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 PTGIRP43119 386 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 BPIFB3P59826 476 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 HAND2P61296 217 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SNX17Q15036 470 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 CARTPTQ16568 116 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ERVMER34-1Q9H9K5 563 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 AAASQ9NRG9 546 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ANKFY1Q9P2R3 1169 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 C1orf232A0A0U1RR37 186 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 hCG_1642624A0A1W2PR95 340 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 C12orf71A8MTZ7 269 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 H3BNH8 94 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TCEA3O75764 348 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ZBTB7AO95365 584 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 H6PDO95479 791 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TRIM23P36406 574 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 ABCG1P45844 678 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 GSTO1P78417 241 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 TARDBPQ13148 414 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 MAPK7Q13164 816 aa11.38□□□□□ -0.59
SEMA4B-204ENST00000558065 SPARCL1Q14515 664 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms