RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CCDC70Q6NSX1 233 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 DCLRE1AQ6PJP8 1040 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MFSD7Q6UXD7 560 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SLC39A5Q6ZMH5 540 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 CYP4V2Q6ZWL3 525 aaPredicted RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 ANKRD33Q7Z3H0 272 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MTERF4Q7Z6M4 381 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 PIGZQ86VD9 579 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 COLGALT2Q8IYK4 626 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 EXD1Q8NHP7 514 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 HASPINQ8TF76 798 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 AENQ8WTP8 325 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 SEC14L1Q92503 715 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 NDRG1Q92597 394 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 MAGOHBQ96A72 148 aaKnown RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 ACSF2Q96CM8 615 aaPredicted RBP7.73□□□□□ -1.17
SPG11-204ENST00000557866 VWCEQ96DN2 955 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TNIP3Q96KP6 325 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SUSD3Q96L08 255 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 HSFY1Q96LI6 401 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SLITRK1Q96PX8 696 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 PEBP4Q96S96 227 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TMEM209Q96SK2 561 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 PKMYT1Q99640 499 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SPOCK3Q9BQ16 436 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 SYT15Q9BQS2 421 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TRIM51Q9BSJ1 452 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 HEMGNQ9BXL5 484 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 FTHL17Q9BXU8 183 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 DUSP16Q9BY84 665 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 OSBPL8Q9BZF1 889 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 MIS12Q9H081 205 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TMEM30AQ9NV96 361 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 TMLHEQ9NVH6 421 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 LCMT1Q9UIC8 334 aa7.73□□□□□ -1.17
SPG11-204ENST00000557866 ELOA3CA0A087WX78 387 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 KRBA1A5PL33 1030 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ELOA3DA6NLF2 546 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 XPO1O14980 1071 aaKnown RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 ATP8B1O43520 1251 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SIN3BO75182 1162 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ERLIN1O75477 346 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 CXCL10P02778 98 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 KRT1P04264 644 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ITGB2P05107 769 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 FAM153BP0C7A2 387 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ODC1P11926 461 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 COL6A1P12109 1028 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 KRT10P13645 584 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 LCP1P13796 627 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 PDGFRAP16234 1089 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 NPR3P17342 541 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 TFE3P19532 575 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 GPD1P21695 349 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 MCM3P25205 808 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 PTPN7P35236 360 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 COILP38432 576 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 ARSEP51690 589 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 PLCB3Q01970 1234 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 TLE2Q04725 743 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 GRIN2CQ14957 1233 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 CLUL1Q15846 466 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 TAZQ16635 292 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 HIF1AQ16665 826 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ELOA3BQ3SY89 546 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 FAM153CQ494X1 144 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 TRIM60Q495X7 471 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 GLB1LQ6UWU2 654 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SPOCD1Q6ZMY3 1216 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 CLEC20AQ6ZU45 233 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 LRRTM3Q86VH5 581 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
SPG11-204ENST00000557866 JAMLQ86YT9 394 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 IFT20Q8IY31 132 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 RCOR2Q8IZ40 523 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ALDH16A1Q8IZ83 802 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 DNAJC5GQ8N7S2 189 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 ZMIZ2Q8NF64 920 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ELOA3Q8NG57 546 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 OR10T2Q8NGX3 314 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 CCDC26Q8TAB7 109 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 MYCBPAPQ8TBZ2 947 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SPATA18Q8TC71 538 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 DIS3LQ8TF46 1054 aaKnown RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 C1orf54Q8WWF1 131 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
SPG11-204ENST00000557866 ATG4AQ8WYN0 398 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SEPT8Q92599 483 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 PCED1BQ96HM7 432 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SCLYQ96I15 445 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 ZNF333Q96JL9 665 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 UROC1Q96N76 676 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 CASD1Q96PB1 797 aa7.72□□□□□ -1.17
SPG11-204ENST00000557866 SMOQ99835 787 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms