RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GRK5P34947 590 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ATP6V1E1P36543 226 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 PNPLA4P41247 253 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 GSTM5P46439 218 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 PCP4P48539 62 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 LMAN1P49257 510 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ADCY7P51828 1080 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 PGDP52209 483 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 RRADP55042 308 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 RPL7AP62424 266 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 WASHC5Q12768 1159 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 EIF2B5Q13144 721 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 PPP2R5CQ13362 524 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 BOP1Q14137 746 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 SMC1AQ14683 1233 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 CRYMQ14894 314 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ASIC2Q16515 512 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ZIK1Q3SY52 487 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 PLEKHS1Q5SXH7 462 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CERCAMQ5T4B2 595 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MSANTD2Q6P1R3 559 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 INTS5Q6P9B9 1019 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 TMEM154Q6P9G4 183 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MFSD6Q6ZSS7 791 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 USP30Q70CQ3 517 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MED25Q71SY5 747 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CCDC91Q7Z6B0 441 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 DNAJB7Q7Z6W7 309 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 SLFN11Q7Z7L1 901 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ADGRG6Q86SQ4 1221 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 WFDC3Q8IUB2 231 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CNTROBQ8N137 903 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 OR8H3Q8N146 312 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 FSTL5Q8N475 847 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 RFWD2Q8NHY2 731 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SLC2A12Q8TD20 617 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 POMGNT1Q8WZA1 660 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SH3KBP1Q96B97 665 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 RPL10LQ96L21 214 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 PWWP2AQ96N64 755 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 LENG8Q96PV6 779 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 NR1H4Q96RI1 486 aaPredicted RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 WDR24Q96S15 920 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CD180Q99467 661 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 GPR20Q99678 358 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SYT3Q9BQG1 590 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MECRQ9BV79 373 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ENKD1Q9H0I2 346 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CD248Q9HCU0 757 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SLC35C2Q9NQQ7 365 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 TPSG1Q9NRR2 321 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MRPS18AQ9NVS2 196 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 EHD2Q9NZN4 543 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 MRPL15Q9P015 296 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 HCN3Q9P1Z3 774 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SEL1LQ9UBV2 794 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 LIMA1Q9UHB6 759 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 GTF3C4Q9UKN8 822 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 CDYLQ9Y232 598 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 DRG1Q9Y295 367 aaKnown RBP4.12□□□□□ -1.75
TDP1-217ENST00000557782 ZBTB1Q9Y2K1 713 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 ENTPD2Q9Y5L3 495 aa4.12□□□□□ -1.75
TDP1-217ENST00000557782 SH2D7A6NKC9 451 aaPredicted RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 TBKBP1A7MCY6 615 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 H0Y626 953 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 SEC14L2O76054 403 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 CSPG5O95196 566 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 METTL18O95568 372 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 ITGB1P05556 798 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 CYP21A2P08686 494 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 HGFP14210 728 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 CDH2P19022 906 aaPredicted RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 CHRM3P20309 590 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PSMA3P25788 255 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PIK3CAP42336 1068 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 GCLCP48506 637 aaPredicted RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 MTHFSP49914 203 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 EIF3BP55884 814 aaKnown RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 RBP5P82980 135 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PPARDQ03181 441 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 ZNF844Q08AG5 666 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 GOLGA8DPQ0D2H9 430 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 AIMP1Q12904 312 aaKnown RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 MYO1EQ12965 1108 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 AIMP2Q13155 320 aaKnown RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 COG2Q14746 738 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 BMP2KLQ5H9B9 411 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 TCP11X2Q5H9J9 407 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 SLC30A10Q6XR72 485 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 KRT27Q7Z3Y8 459 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 SLC15A3Q8IY34 581 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 CFAP52Q8N1V2 620 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 FRMD1Q8N878 549 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 POMGNT2Q8NAT1 580 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PSD4Q8NDX1 1056 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 TNIP2Q8NFZ5 429 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 SUN3Q8TAQ9 357 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 ZCCHC14Q8WYQ9 949 aaKnown RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 TFAP2CQ92754 450 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PHACTR3Q96KR7 559 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms