RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 A0A1B0GVL5 298 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 A0A1W2PQH9 124 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 UPK3BL1B0FP48 263 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 UPK3BL2E5RIL1 263 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CALUO43852 315 aaPredicted RBP16.81■□□□□ 0.28
SCFD1-224ENST00000557713 MYL1P05976 194 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 RARGP13631 454 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 SPINK2P20155 84 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CMA1P23946 247 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 PLA2G4AP47712 749 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 VAMP7P51809 220 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 SEMA3BQ13214 749 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 DUOXA1Q1HG43 343 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 SDE2Q6IQ49 451 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 KIAA1211LQ6NV74 962 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 Q6ZNB5 142 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 PIP4P1Q86T03 277 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CHPFQ8IZ52 775 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CEP76Q8TAP6 659 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 IPO4Q8TEX9 1081 aaKnown RBP16.81■□□□□ 0.28
SCFD1-224ENST00000557713 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCFD1-224ENST00000557713 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 LSM7Q9UK45 103 aaKnown RBP16.81■□□□□ 0.28
SCFD1-224ENST00000557713 FBXO10Q9UK96 956 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 NUDT5Q9UKK9 219 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CHD6Q8TD26 2715 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 CFAP47Q6ZTR5 3102 aa16.81■□□□□ 0.28
SCFD1-224ENST00000557713 MDM4O15151 490 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 ZNF217O75362 1048 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 SERPINF2P08697 491 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 PFKFB1P16118 471 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 NDUFV2P19404 249 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
SCFD1-224ENST00000557713 GCLMP48507 274 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 DGKGP49619 791 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 KIF11P52732 1056 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
SCFD1-224ENST00000557713 ZNF33AQ06730 810 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 PPP3CAQ08209 521 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 GOLGA8FQ08AF8 430 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 GOLGA8DPQ0D2H9 430 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 NFIL3Q16649 462 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 SCD5Q86SK9 330 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 KDF1Q8NAX2 398 aaPredicted RBP16.8■□□□□ 0.28
SCFD1-224ENST00000557713 TAS1R2Q8TE23 839 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 JAKMIP2Q96AA8 810 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 P2RY11Q96G91 374 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 SLC32A1Q9H598 525 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 CAPN10Q9HC96 672 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 FSCN3Q9NQT6 498 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 DNMT3LQ9UJW3 386 aa16.8■□□□□ 0.28
SCFD1-224ENST00000557713 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
SCFD1-224ENST00000557713 GFRA2O00451 464 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 CILPO75339 1184 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 STC2O76061 302 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 CFIP05156 583 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 PSEN1P49768 467 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 GFPT1Q06210 699 aaPredicted RBP16.79■□□□□ 0.28
SCFD1-224ENST00000557713 ENPEPQ07075 957 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 C10orf120Q5SQS8 335 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 CCDC186Q7Z3E2 898 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 ZNF419Q96HQ0 510 aaPredicted RBP16.79■□□□□ 0.28
SCFD1-224ENST00000557713 SCNM1Q9BWG6 230 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 DUSP16Q9BY84 665 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 CYP8B1Q9UNU6 501 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 USP3Q9Y6I4 520 aa16.79■□□□□ 0.28
SCFD1-224ENST00000557713 WASH3PC4AMC7 463 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 ZBTB24O43167 697 aaPredicted RBP16.78■□□□□ 0.28
SCFD1-224ENST00000557713 RHOBTB3O94955 611 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 KIF20AO95235 890 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 KLKB1P03952 638 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
SCFD1-224ENST00000557713 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 NR2F2P24468 414 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 PPP1R26Q5T8A7 1209 aaPredicted RBP16.78■□□□□ 0.28
SCFD1-224ENST00000557713 INTS8Q75QN2 995 aaKnown RBP16.78■□□□□ 0.28
SCFD1-224ENST00000557713 RABEPKQ7Z6M1 372 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 HSCBQ8IWL3 235 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 GATA6Q92908 595 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 ERLEC1Q96DZ1 483 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 MRGPRX1Q96LB2 322 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 IMPG2Q9BZV3 1241 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 SLC6A17Q9H1V8 727 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 CACNA2D2Q9NY47 1150 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 CLIC5Q9NZA1 410 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 ZMIZ1Q9ULJ6 1067 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 SLC27A6Q9Y2P4 619 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms