RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 CUL5Q93034 780 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 HPS3Q969F9 1004 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 FKBP10Q96AY3 582 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 TEKT5Q96M29 485 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 FAM118BQ9BPY3 351 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 CHCHD6Q9BRQ6 235 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 SLC26A6Q9BXS9 759 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 GTPBP4Q9BZE4 634 aaKnown RBP3.8□□□□□ -1.8
FOXN3-217ENST00000557572 TPSD1Q9BZJ3 242 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 AMBRA1Q9C0C7 1298 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 PLEKHA5Q9HAU0 1116 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 ATP6V0A4Q9HBG4 840 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 GIMAP2Q9UG22 337 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 SH2B3Q9UQQ2 575 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 LRCH1Q9Y2L9 728 aa3.8□□□□□ -1.8
FOXN3-217ENST00000557572 A0A087WV62 115 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 PABPN1LA6NDY0 278 aaKnown RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 B4DGG1 531 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 FCHO1O14526 889 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 OFD1O75665 1012 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 TUSC2O75896 110 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ARIH2O95376 493 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ATP1A3P13637 1013 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 VCAM1P19320 739 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 AKAP5P24588 427 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 TDO2P48775 406 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 SRSF2Q01130 221 aaKnown RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 KIAA0753Q2KHM9 967 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 CCDC38Q502W7 563 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ATAT1Q5SQI0 421 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ZNF618Q5T7W0 954 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 TAPT1Q6NXT6 567 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 CCDC129Q6ZRS4 1044 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 COL23A1Q86Y22 540 aaPredicted RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 OR2C3Q8N628 320 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 AOPEPQ8N6M6 819 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 APPL2Q8NEU8 664 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 IFI44Q8TCB0 444 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 ADAMTS18Q8TE60 1221 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 TGFBRAP1Q8WUH2 860 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 IPCEF1Q8WWN9 437 aaPredicted RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 SH3KBP1Q96B97 665 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 SEC62Q99442 399 aaKnown RBP3.79□□□□□ -1.8
FOXN3-217ENST00000557572 SMOQ99835 787 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 PACSIN1Q9BY11 444 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 FAM234AQ9H0X4 552 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 CXorf56Q9H5V9 222 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 RLIMQ9NVW2 624 aa3.79□□□□□ -1.8
FOXN3-217ENST00000557572 KLHL33A6NCF5 533 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 B4E171 279 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 EIF3FO00303 357 aaPredicted RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TOMM40O96008 361 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CHEK2O96017 543 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CGAP01215 116 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 RPS6KB1P23443 525 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 NDUFV1P49821 464 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TUBP50607 506 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 SCAND1P57086 179 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 HOXA4Q00056 320 aaPredicted RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 RAB39AQ14964 217 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 ITPRIPL1Q6GPH6 555 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 HIBCHQ6NVY1 386 aaPredicted RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 PLBD1Q6P4A8 553 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 BRINP3Q76B58 766 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CUZD1Q86UP6 607 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TMTC1Q8IUR5 882 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 ANKRD18AQ8IVF6 992 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 LMNTD2Q8IXW0 634 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 GRAMD1CQ8IYS0 662 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 KIAA0319LQ8IZA0 1049 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TMIEQ8NEW7 156 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 JADE3Q92613 823 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 SCAMP4Q969E2 229 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 SNX21Q969T3 373 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CCDC47Q96A33 483 aaKnown RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CAMK1GQ96NX5 476 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TRIB1Q96RU8 372 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TTLL2Q9BWV7 592 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CCM2LQ9NUG4 571 aaPredicted RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 SIDT1Q9NXL6 827 aaKnown RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 CALCOCO1Q9P1Z2 691 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 FEZ2Q9UHY8 353 aaPredicted RBP3.78□□□□□ -1.8
FOXN3-217ENST00000557572 TMCC3Q9ULS5 477 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 SNX5Q9Y5X3 404 aa3.78□□□□□ -1.8
FOXN3-217ENST00000557572 FAM170AA1A519 330 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 GTPBP10A4D1E9 387 aaKnown RBP3.77□□□□□ -1.81
FOXN3-217ENST00000557572 TSPY2A6NKD2 308 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 SMTNL1A8MU46 457 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 QSOX1O00391 747 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 KPNA5O15131 536 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 FRS3O43559 492 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 AHCYL1O43865 530 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 TBX18O95935 607 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 POLBP06746 335 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 POU2F2P09086 479 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 SBK3P0C264 359 aa3.77□□□□□ -1.81
FOXN3-217ENST00000557572 DHRS4L1P0CG22 281 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms