RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 JADE1Q6IE81 842 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 ZNF564Q8TBZ8 553 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-211ENST00000557454 BRF1Q92994 677 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 TUFT1Q9NNX1 390 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 LRWD1Q9UFC0 647 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 ATXN7L1Q9ULK2 861 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-211ENST00000557454 PLAAQ9Y263 795 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 PCNX1Q96RV3 2341 aa10.02□□□□□ -0.8
NEDD1-211ENST00000557454 ARID1BQ8NFD5 2236 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 PMS2P1A4D2B8 440 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 CLDN3O15551 220 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 OPA1O60313 960 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 CACNG3O60359 315 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 SYNCRIPO60506 623 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 CPA1P15085 419 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 TAF6P49848 677 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 BCAT1P54687 386 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 RACK1P63244 317 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 ASIC1P78348 528 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 ENOX2Q16206 610 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 TBR1Q16650 682 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 INTS6LQ5JSJ4 861 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 IGF2-ASQ6U949 168 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 TICAM1Q8IUC6 712 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 SPATA2LQ8IUW3 424 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 SRRM1Q8IYB3 904 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 WBP2Q969T9 261 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 SLC46A1Q96NT5 459 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 XPO6Q96QU8 1125 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 KMT5AQ9NQR1 393 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 TMPRSS4Q9NRS4 437 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
NEDD1-211ENST00000557454 GTF3C4Q9UKN8 822 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 SH3BP1Q9Y3L3 701 aa10.02□□□□□ -0.81
NEDD1-211ENST00000557454 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 A1L4Q6 167 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 CDRT15L2A8MXV6 281 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
NEDD1-211ENST00000557454 SLC16A4O15374 487 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 GJB6O95452 261 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 TYRP14679 529 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 CASRP41180 1078 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 ARRB1P49407 418 aaPredicted RBP10.01□□□□□ -0.81
NEDD1-211ENST00000557454 DGKGP49619 791 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 MYL7Q01449 175 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 CLCA4Q14CN2 919 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 CFAP221Q4G0U5 840 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 Q6ZUG5 572 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 DENND5BQ6ZUT9 1274 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 KANSL1Q7Z3B3 1105 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 DAW1Q8N136 415 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 BBS2Q9BXC9 721 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 CCSER1Q9C0I3 900 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
NEDD1-211ENST00000557454 LHX5Q9H2C1 402 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 GDF3Q9NR23 364 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 GEMIN8Q9NWZ8 242 aaKnown RBP10.01□□□□□ -0.81
NEDD1-211ENST00000557454 PTPRJQ12913 1337 aa10.01□□□□□ -0.81
NEDD1-211ENST00000557454 TRIM38O00635 465 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 CYP26A1O43174 497 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 HCRTO43612 131 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 SIGLEC6O43699 453 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 AGFG2O95081 481 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 DEXIO95424 95 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 IGHV4-34P06331 123 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 IRF1P10914 325 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 PRKCHP24723 683 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 GRNP28799 593 aaKnown RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 MLLT3P42568 568 aaPredicted RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 ZNF132P52740 706 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 DAB2P98082 770 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 TMEM132DQ14C87 1099 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 RNF20Q5VTR2 975 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 TPGS1Q6ZTW0 290 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 PDCL2Q8N4E4 241 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 NSUN7Q8NE18 718 aaKnown RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 SPATA20Q8TB22 786 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 BHMTQ93088 406 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 PRR11Q96HE9 360 aaPredicted RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 SPATA17Q96L03 361 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 ACBD6Q9BR61 282 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 TTLL2Q9BWV7 592 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 BTBD1Q9H0C5 482 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 BHMT2Q9H2M3 363 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 DDX43Q9NXZ2 648 aaKnown RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 THAP10Q9P2Z0 257 aaPredicted RBP10□□□□□ -0.81
NEDD1-211ENST00000557454 SCN1AP35498 2009 aa10□□□□□ -0.81
NEDD1-211ENST00000557454 A0A1B0GVM2 712 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 KPNA7A9QM74 516 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 COCHO43405 550 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 FAM189A1O60320 539 aa9.99□□□□□ -0.81
NEDD1-211ENST00000557454 SDC3O75056 442 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms