RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PPME1Q9Y570 386 aa18.39■□□□□ 0.53
XRCC3-218ENST00000557439 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-218ENST00000557439 P4HA1P13674 534 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 GNAZP19086 355 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 SDC4P31431 198 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 ATICP31939 592 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 GMPRP36959 345 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 RBP5P82980 135 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 ACAP1Q15027 740 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 KIZQ2M2Z5 673 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 HSF5Q4G112 596 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-218ENST00000557439 KHDC1Q4VXA5 237 aaKnown RBP18.38■□□□□ 0.53
XRCC3-218ENST00000557439 FAM47CQ5HY64 1035 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 ZNF534Q76KX8 674 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 FBXO27Q8NI29 283 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 MIEF2Q96C03 454 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 MAF1Q9H063 256 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 ASB7Q9H672 318 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 TMPRSS4Q9NRS4 437 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 SNTG2Q9NY99 539 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 CEP350Q5VT06 3117 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 SLC15A5A6NIM6 579 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 CCDC130P13994 396 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 CALB2P22676 271 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 CYP2F1P24903 491 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 ADORA2BP29275 332 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 TAF11Q15544 211 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 GPC2Q8N158 579 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 STK32AQ8WU08 396 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 APOL6Q9BWW8 343 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 C20orf27Q9GZN8 174 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 NMUR2Q9GZQ4 415 aa18.38■□□□□ 0.53
XRCC3-218ENST00000557439 IQCGQ9H095 443 aaKnown RBP18.38■□□□□ 0.53
XRCC3-218ENST00000557439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 HMX2A2RU54 273 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 RFPL1O75677 317 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 NPTXRO95502 500 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 F7P08709 466 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 LCP1P13796 627 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 ADORA2AP29274 412 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 ADCYAP1R1P41586 468 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 ABL2P42684 1182 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 TNFAIP2Q03169 654 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 TTC39BQ5VTQ0 682 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 APBB1IPQ7Z5R6 666 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 EXOC8Q8IYI6 725 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SKA1Q96BD8 255 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 PTCD3Q96EY7 689 aaKnown RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 CDK16Q00536 496 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SLC6A3Q01959 620 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 BST1Q10588 318 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 ZNF618Q5T7W0 954 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 MAP7D3Q8IWC1 876 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 CCDC185Q8N715 623 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 OR6B3Q8NGW1 331 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 NRDE2Q9H7Z3 1164 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SLC25A27O95847 323 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 PAX7P23759 505 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SOWAHAQ2M3V2 549 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 ARID3BQ8IVW6 561 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 MPHOSPH6Q99547 160 aaKnown RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 EIF2AQ9BY44 585 aaKnown RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 KLC2Q9H0B6 622 aa18.37■□□□□ 0.53
XRCC3-218ENST00000557439 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-218ENST00000557439 SYNJ2BP-COX16A0A087WUM0 186 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 E2F8A0AVK6 867 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 FCHO1O14526 889 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 WFS1O76024 890 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 AMPD1P23109 780 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 SLC26A2P50443 739 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 TMPRSS15P98073 1019 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 CHI3L2Q15782 390 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 BSPRYQ5W0U4 402 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 SLC9A4Q6AI14 798 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 KCNT2Q6UVM3 1135 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 CHSY1Q86X52 802 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 LINC01465Q8N7H1 131 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 DCPSQ96C86 337 aaKnown RBP18.36■□□□□ 0.53
XRCC3-218ENST00000557439 CDHR5Q9HBB8 845 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 COX16Q9P0S2 106 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 TRAFD1O14545 582 aaPredicted RBP18.36■□□□□ 0.53
XRCC3-218ENST00000557439 SNRPAP09012 282 aaKnown RBP18.36■□□□□ 0.53
XRCC3-218ENST00000557439 RASSF2P50749 326 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 R3HDM1Q15032 1099 aaKnown RBP18.36■□□□□ 0.53
XRCC3-218ENST00000557439 FAM187BQ17R55 369 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 BOLA3Q53S33 107 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 C16orf46Q6P387 395 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 DENND5BQ6ZUT9 1274 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 SLC35F5Q8WV83 523 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 WDR60Q8WVS4 1066 aa18.36■□□□□ 0.53
XRCC3-218ENST00000557439 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 GSC2O15499 205 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 APOEP02649 317 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 LMO2P25791 158 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 L1CAMP32004 1257 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms