RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 APOA5Q6Q788 366 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 SYNE3Q6ZMZ3 975 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 MIER3Q7Z3K6 550 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 BRAPQ7Z569 592 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 CEP57Q86XR8 500 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 CPNE8Q86YQ8 564 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 AHI1Q8N157 1196 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 RNF149Q8NC42 400 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 CCDC136Q96JN2 1154 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 EDEM2Q9BV94 578 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 NXF3Q9H4D5 531 aaKnown RBP7.42□□□□□ -1.22
LINC00640-204ENST00000557295 RBM12Q9NTZ6 932 aaKnown RBP7.42□□□□□ -1.22
LINC00640-204ENST00000557295 C2orf42Q9NWW7 574 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 SLAMF8Q9P0V8 285 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 MTRRQ9UBK8 725 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 NEUROG3Q9Y4Z2 214 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 RBM8AQ9Y5S9 174 aaKnown RBP7.42□□□□□ -1.22
LINC00640-204ENST00000557295 PATJQ8NI35 1801 aa7.42□□□□□ -1.22
LINC00640-204ENST00000557295 C2orf16Q68DN1 1984 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 KAT6AQ92794 2004 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 DSPP15924 2871 aaKnown RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 A0A1W2PQJ5 194 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 WDR27A2RRH5 827 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 MYBPHLA2RUH7 354 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 C4orf47A7E2U8 309 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 SGSM2O43147 1006 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 NPHS1O60500 1241 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TOP3BO95985 862 aaKnown RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 ESR1P03372 595 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 AKAP5P24588 427 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 GNA11P29992 359 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 NPEPPSP55786 919 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 PTENP60484 403 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 POU5F1BQ06416 359 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 Q4G0T1 1027 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 PLA2G4FQ68DD2 849 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TCEAL6Q6IPX3 200 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 SLC8B1Q6J4K2 584 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 FERMT3Q86UX7 667 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 RALGPS2Q86X27 583 aaPredicted RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 MFSD6LQ8IWD5 586 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 ZC3H7AQ8IWR0 971 aaKnown RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 USP33Q8TEY7 942 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 HASPINQ8TF76 798 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CCDC12Q8WUD4 166 aaPredicted RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TCP11Q8WWU5 503 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TCEAL3Q969E4 200 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TMEM143Q96AN5 459 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 E2F7Q96AV8 911 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TCEAL4Q96EI5 215 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CCDC120Q96HB5 630 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 ZSWIM3Q96MP5 696 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CLUHP3Q96NS8 147 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 ZFYVE21Q9BQ24 234 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 APOL6Q9BWW8 343 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 TRIM6Q9C030 488 aaPredicted RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 SMOC1Q9H4F8 434 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 GPR27Q9NS67 375 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 INTS7Q9NVH2 962 aaKnown RBP7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CDY1Q9Y6F8 540 aa7.41□□□□□ -1.22
LINC00640-204ENST00000557295 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 A0A1B0GUA9 196 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 LNP1A1A4G5 178 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CASTOR2A6NHX0 329 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 SPECC1L-ADORA2AF8WAN1 911 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CHADO15335 359 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 ZBTB43O43298 467 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 EXTL3O43909 919 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 DKC1O60832 514 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 ABLIM3O94929 683 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CRTAMO95727 393 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 LRG1P02750 347 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 ASLP04424 464 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CAPNS1P04632 268 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CCDC192P0DO97 292 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 GSPT1P15170 499 aaKnown RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 ARF4P18085 180 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CYP3A7P24462 503 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 HOXC13P31276 330 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 SSTR4P31391 388 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 VIPR2P41587 438 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 CCR2P41597 374 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 QARSP47897 775 aaKnown RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 KPNA1P52294 538 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 RCAN1P53805 252 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 EPHA5P54756 1037 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 GPR85P60893 370 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 TEKQ02763 1124 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 MBTD1Q05BQ5 628 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 FCHO2Q0JRZ9 810 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 MXD4Q14582 209 aaPredicted RBP7.4□□□□□ -1.22
LINC00640-204ENST00000557295 NAB2Q15742 525 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 NTRK3Q16288 839 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 PLK5Q496M5 336 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 ARTNQ5T4W7 220 aa7.4□□□□□ -1.22
LINC00640-204ENST00000557295 SLC27A1Q6PCB7 646 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms