RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 N4BP2L2Q92802 583 aaPredicted RBP15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 FGD4Q96M96 766 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 TMEM109Q9BVC6 243 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 PTPRHQ9HD43 1115 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 PRM3Q9NNZ6 103 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 ACSS2Q9NR19 701 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 TXLNGQ9NUQ3 528 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 FIS1Q9Y3D6 152 aa15.9■□□□□ 0.14
TMEM55B-207ENST00000557041 CLUHO75153 1309 aa15.89■□□□□ 0.14
TMEM55B-207ENST00000557041 FAM189A1O60320 539 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 KRT38O76015 456 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 B3GAT3O94766 335 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 PGK1P00558 417 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 MMP3P08254 477 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 TPH1P17752 444 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 PCK1P35558 622 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 ZNF157P51786 506 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 OLIG2Q13516 323 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 CHI3L2Q15782 390 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 BRI3BPQ8WY22 251 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 TNIP3Q96KP6 325 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 FBXO6Q9NRD1 293 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 SENP1Q9P0U3 644 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 RABGEF1Q9UJ41 708 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 WDR27A2RRH5 827 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 ARHGAP42A6NI28 874 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 NDC80O14777 642 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 ALDH18A1P54886 795 aaKnown RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 MTFR1Q15390 333 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 TRMT10BQ6PF06 316 aaKnown RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 CXCL17Q6UXB2 119 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 LONP2Q86WA8 852 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 GBA2Q9HCG7 927 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 ETNK2Q9NVF9 386 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 A0A1B0GUA9 196 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 GYG2O15488 501 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 SNAI1O95863 264 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 MLH1P40692 756 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 LCLAT1Q6UWP7 414 aa15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 CDKL3Q8IVW4 592 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 RIBC1Q8N443 379 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 ZNF395Q9H8N7 513 aaPredicted RBP15.89■□□□□ 0.13
TMEM55B-207ENST00000557041 IGKV6-21A0A0C4DH24 114 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SMIM28A0A1B0GU29 152 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 AP1G2O75843 785 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 DCTN3O75935 186 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 HAUS5O94927 633 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 BAG2O95816 211 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ENO1P06733 434 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SOWAHAQ2M3V2 549 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 EFHC2Q5JST6 749 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 IL31Q6EBC2 164 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 OTOAQ7RTW8 1153 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 CDKL2Q92772 493 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ATP2A3Q93084 1043 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 NRDE2Q9H7Z3 1164 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 RXFP1Q9HBX9 757 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 KRT82Q9NSB4 513 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 C5orf60A6NFR6 353 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 EPHB2P29323 1055 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SLC8A1P32418 973 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 TKTL1P51854 596 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 BCAT1P54687 386 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 NCALDP61601 193 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 EMC10Q5UCC4 262 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 COLGALT1Q8NBJ5 622 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 NPLOC4Q8TAT6 608 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 MAML3Q96JK9 1138 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 L3MBTL3Q96JM7 780 aaPredicted RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ZNF560Q96MR9 790 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 PARK7Q99497 189 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 C16orf70Q9BSU1 422 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ZFATQ9P243 1243 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SLC24A2Q9UI40 661 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 CNTN6Q9UQ52 1028 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 FNDC3AQ9Y2H6 1198 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 MCM3APO60318 1980 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 IQCA1LA6NCM1 817 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ABLIM1O14639 778 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 ATP6V1G2O95670 118 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 USP17L7P0C7H9 530 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 TYK2P29597 1187 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 BST2Q10589 180 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 MFSD10Q14728 455 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 MICAL1Q8TDZ2 1067 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 STMN2Q93045 179 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 RSRC1Q96IZ7 334 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 SRPK1Q96SB4 655 aaKnown RBP15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 PPP1R12CQ9BZL4 782 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 C2CD2Q9Y426 696 aa15.88■□□□□ 0.13
TMEM55B-207ENST00000557041 DFFAO00273 331 aa15.87■□□□□ 0.13
TMEM55B-207ENST00000557041 MYL2P10916 166 aa15.87■□□□□ 0.13
TMEM55B-207ENST00000557041 NCF2P19878 526 aaPredicted RBP15.87■□□□□ 0.13
TMEM55B-207ENST00000557041 SERPINB3P29508 390 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms