RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SOX17Q9H6I2 414 aaPredicted RBP10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 AGPAT3Q9NRZ7 376 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 KRT82Q9NSB4 513 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 DLGAP2Q9P1A6 1054 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 ATP6V1DQ9Y5K8 247 aa10.51□□□□□ -0.73
HNRNPC-228ENST00000557033 ZDBF2Q9HCK1 2354 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 TSC2P49815 1807 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 GABRDO14764 452 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 NCAM2O15394 837 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MAN1A2O60476 641 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 FAM163BP0C2L3 166 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ARAFP10398 606 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 GLULP15104 373 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 GJA1P17302 382 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MAGEA9P43362 315 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 AFMP43652 599 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MLLT6P55198 1093 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 KRT85P78386 507 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 CTBSQ01459 385 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 CUL4BQ13620 913 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ANGPT1Q15389 498 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 SNRNP35Q16560 246 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 KNOP1Q1ED39 458 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ZNF852Q6ZMS4 543 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 CBWD2Q8IUF1 395 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MFSD6LQ8IWD5 586 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 PDCL2Q8N4E4 241 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 XXYLT1Q8NBI6 393 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 RIN3Q8TB24 985 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 PAGE5Q96GU1 130 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 HPDLQ96IR7 371 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 SEPT5Q99719 369 aaPredicted RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ASPSCR1Q9BZE9 553 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MTMR12Q9C0I1 747 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ATXN3LQ9H3M9 355 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 BRD9Q9H8M2 597 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 DDX43Q9NXZ2 648 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 SIX4Q9UIU6 781 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 MRPS17Q9Y2R5 130 aaKnown RBP10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 ZDHHC9Q9Y397 364 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 SNX9Q9Y5X1 595 aa10.5□□□□□ -0.73
HNRNPC-228ENST00000557033 FAM170BA6NMN3 283 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 CHURC1-FNTBB4DL54 471 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 MAN2B1O00754 1011 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 ZNF263O14978 683 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SIN3BO75182 1162 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 KATNA1O75449 491 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SOAT2O75908 522 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 DCNP07585 359 aaKnown RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 CPEP16870 476 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 ATF6P18850 670 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 EPHA1P21709 976 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 GABRR2P28476 465 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 PCSK1P29120 753 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 CASP1P29466 404 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 CDC25CP30307 473 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 VIPR2P41587 438 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 GSTM4Q03013 218 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 BFSP1Q12934 665 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 PSMD6Q15008 389 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 TAF12Q16514 161 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SOWAHAQ2M3V2 549 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 ARHGAP15Q53QZ3 475 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 YOD1Q5VVQ6 348 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 VITQ6UXI7 678 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 TRAPPC11Q7Z392 1133 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 LIMS2Q7Z4I7 341 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 C1orf210Q8IVY1 113 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 NELFCDQ8IXH7 590 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 FNBP1Q96RU3 617 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SCAND2PQ9GZW5 306 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SEMA4AQ9H3S1 761 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SLITRK6Q9H5Y7 841 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 CCDC86Q9H6F5 360 aaKnown RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 TASP1Q9H6P5 420 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 ZNF334Q9HCZ1 680 aaPredicted RBP10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 SLC39A2Q9NP94 309 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 OBP2AQ9NY56 170 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 L1RE1Q9UN81 338 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 HPSEQ9Y251 543 aa10.49□□□□□ -0.73
HNRNPC-228ENST00000557033 FAM237AA0A1B0GTK4 181 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 A0A1B0GVL5 298 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 HEPACAM2A8MVW5 462 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 CLIC2O15247 247 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 CHADO15335 359 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 KLRC4O43908 158 aa10.48□□□□□ -0.73
HNRNPC-228ENST00000557033 GFRA3O60609 400 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms